KEGG   Ailuropoda melanoleuca (giant panda): 100479839Help
Entry
100479839         CDS       T01329                                 

Definition
retinoic acid receptor RXR-alpha-like
Orthology
K08524  
retinoid X receptor alpha
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
PPAR signaling pathway
PI3K-Akt signaling pathway
Thyroid hormone signaling pathway
Adipocytokine signaling pathway
Non-alcoholic fatty liver disease (NAFLD)
Bile secretion
Hepatitis C
Pathways in cancer
Transcriptional misregulation in cancer
Thyroid cancer
Small cell lung cancer
Non-small cell lung cancer
Brite
KEGG Orthology (KO) [BR:aml00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    100479839
 Organismal Systems
  Endocrine system
   04920 Adipocytokine signaling pathway
    100479839
   03320 PPAR signaling pathway
    100479839
   04919 Thyroid hormone signaling pathway
    100479839
  Digestive system
   04976 Bile secretion
    100479839
 Human Diseases
  Cancers
   05200 Pathways in cancer
    100479839
   05202 Transcriptional misregulation in cancers
    100479839
   05216 Thyroid cancer
    100479839
   05222 Small cell lung cancer
    100479839
   05223 Non-small cell lung cancer
    100479839
  Endocrine and metabolic diseases
   04932 Non-alcoholic fatty liver disease (NAFLD)
    100479839
  Infectious diseases
   05160 Hepatitis C
    100479839
Transcription factors [BR:aml03000]
 Eukaryotic Type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    100479839
Nuclear receptors [BR:aml03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   100479839
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
Un
AA seq 516 aa AA seqDB search
MVVMVTVIVMTMTVVMMVVMMVTMIVVTVMVMMVAMTVVILMVMMMVGKQSFRKVGAEDF
STQVNSSSLNSPTGRGSMAAPSLHPSLGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFS
VISSPMGPHSMSVPTTPTLGFGTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGN
MASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLICAREAQR
CECLRYQRGLTTAPTRTAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKT
ETYVDANMGLNPNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWN
ELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTE
LGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALR
SIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1551 nt NT seq  +upstreamnt  +downstreamnt
atggtggtgatggtgactgtgatagtgatgacgatgacggtggtgatgatggtggtgatg
atggtgacgatgattgttgtgactgtgatggtgatgatggtggcgatgactgtagtgatt
ctgatggtgatgatgatggtggggaagcagtccttccggaaggtgggtgccgaagacttc
tccacccaggtgaactcctcgtccctcaactcccccacggggcgtggctccatggctgcc
ccctccctgcacccctctctggggcccggcatcggctcctcgctcggctccccgggacag
ctgcattcgcccatcagcaccctgagctcccccatcaacggcatgggcccacccttctcg
gtcatcagctcccccatgggcccccactccatgtcagtgcccaccacgcctaccctgggc
ttcggcaccggcagccctcagctcagctcacccatgaaccccgtcagcagcagcgaggac
atcaagcccccgctgggcctcaatggtgtcctcaaagtcccggcccacccctcagggaac
atggcgtccttcaccaagcacatctgtgccatctgtggggaccgctcctcaggcaagcac
tatggggtgtacagctgcgagggctgcaagggcttcttcaagcggacggtgcgcaaggac
ctgacctacacgtgccgggacaacaaggactgcctgatctgcgcacgggaggcacagagg
tgtgagtgcctcaggtaccagcgtgggctgaccaccgcccccacccgtacagctgtgcag
gaggaacggcagcggggcaaggacaggaacgagaacgaggtggagtccacgagcagtgcc
aacgaggacatgccggtggagaagattctggaggcagagctggctgtcgagcccaagacc
gagacgtacgtggacgcaaacatggggctgaacccaaactcgcccaacgaccccgtcacc
aacatctgccaggcagcggacaagcagctcttcacgctggtcgagtgggccaagcggatt
ccgcacttctcggagctgcccctggacgaccaggtcatcctactgagggcaggctggaat
gagctgctcatcgcctccttctcccaccggtccatcgccgtgaaggacgggatcctcctg
gccaccgggctgcacgtccaccggaacagcgcccacagcgcgggggtgggcgccatcttt
gacagggtgttgacggagctcgtgtccaagatgcgggacatgcagatggacaagacggag
ctgggctgcctgcgtgccatcgtactcttcaaccccgactccaaggggctctcgaacccg
gccgaggtcgaggcgctgagggagaaggtctacgcgtccctggaggcgtactgcaaacac
aagtaccccgagcagccgggaaggttcgccaagctgcttctccgcctgccggccctgcgc
tccatcggcctcaagtgcctggaacacctctttttcttcaaactcatcggggacacgccc
atcgacaccttcctcatggagatgctggaagccccccaccaaatgacttag

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