KEGG   Ailuropoda melanoleuca (giant panda): 100479895Help
Entry
100479895         CDS       T01329                                 

Gene name
COMP
Definition
(RefSeq) cartilage oligomeric matrix protein
  KO
K04659  
thrombospondin 2/3/4/5
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
Phagosome
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Malaria
Brite
KEGG Orthology (KO) [BR:aml00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    100479895 (COMP)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100479895 (COMP)
 Cellular Processes
  Transport and catabolism
   04145 Phagosome
    100479895 (COMP)
  Cellular community - eukaryotes
   04510 Focal adhesion
    100479895 (COMP)
 Human Diseases
  Infectious diseases
   05144 Malaria
    100479895 (COMP)
Membrane trafficking [BR:aml04131]
 Endocytosis
  Phagocytosis
   Opsonins
    100479895 (COMP)
Exosome [BR:aml04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100479895 (COMP)
  Exosomal proteins of colorectal cancer cells
   100479895 (COMP)
  Exosomal proteins of bladder cancer cells
   100479895 (COMP)
Cell adhesion molecules and their ligands [BR:aml04516]
 2. Integrin Family
  Beta1 integrins
   VLA-3
    ITGB1; integrin beta 1 [KO:K05719]
     100479895 (COMP)
  Beta3 integrins
   alpha IIb  beta 3
    ITGB3; integrin beta 3 [KO:K06493]
     100479895 (COMP)
   VNR
     100479895 (COMP)
 7. Others
  SDC4; syndecan 4 [KO:K16338]
   100479895 (COMP)
Glycosaminoglycan binding proteins [BR:aml00536]
 Heparan sulfate/Haparin
  Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
   100479895 (COMP)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
Ensembl: 
UniProt: 
Position
Un
AA seq 756 aa AA seqDB search
MVPATACVLLLTLAVLGASGQGQISLGADLGPQMLRELQETNAALQDVRELLRQQVKEIT
FLKNTVMECDACGMQPVRTPGLSVRPLSQCAPGFCYPGVVCTQTPSGARCGPCPAGFTGN
GSHCTDVNECNAHPCFPRVRCINTSPGFRCEACPPGYSGPAHEGVGLAFAKANKQVCTDI
NECETGQHNCVPNSVCVNTQGSFQCGPCQPGFVGDQTSGCKRRSQRSCPDGTPSPCHEKA
DCVLERDGSRSCVCAVGWAGNGLLCGRDTDLDGFPDEKLRCSERQCRKDNCVTVPNSGQE
DVDRDGIGDACDPDADGDGVLNEQDNCKLVRNPDQRNADGDKWGDACDNCRNQKNDDQKD
TDQDGKGDACDDDIDGDRIRNSVDNCPRVPNSDQKDSDGDGVGDACDNCPQKSNPDQGDV
DHDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSDHDGQGDACDEDDDNDGVPDSQ
DNCRLVPNPNQEDLDRDGVGDACQGDFDADKVVDKIDVCPENAEVTLTDFRAFQTVVLDP
EGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIF
GYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPGEQMRNALWHTGDTA
SQVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVLDTTMRGGR
LGVFCFSQENIIWANLRYRCNDTIPEDYETQRLLQA
NT seq 2271 nt NT seq  +upstreamnt  +downstreamnt
atggttcctgccaccgcctgcgttctcctgctcaccctggccgtcctcggcgcgtcaggt
cagggccagatatcactaggtgcagatctgggcccgcagatgcttcgggaacttcaggag
accaacgcggcgttgcaggatgtgcgggagctgttacggcagcaggtcaaggagatcacg
tttctgaaaaatacagtgatggagtgtgatgcgtgcgggatgcagcccgtgcgcaccccg
ggtctgagcgtgcggcccctatcccagtgcgcgcccggcttctgctacccaggcgtggtc
tgcactcagacgccgagcggcgcgcgctgtggaccctgtcccgcgggcttcactggcaat
ggctcgcactgcaccgacgtcaacgagtgcaacgcccatccctgcttcccccgcgtccgc
tgcatcaacaccagccccggcttccgctgcgaggcttgcccgccggggtacagcggcccc
gctcacgagggcgtggggctggccttcgccaaggccaacaaacaggtttgcacggacatt
aacgaatgtgagacagggcagcataactgcgttcccaactccgtgtgcgtcaatacccag
ggctccttccagtgcggcccttgccagcccggcttcgtaggcgaccagacatctggctgc
aagcggcgctcacagcgctcctgccccgacggcacgcccagcccgtgccacgagaaggcc
gactgcgttctggaacgcgatggctcgcgatcgtgcgtatgcgccgttggctgggcaggc
aacgggctcctctgcggccgagacacggatttggacggcttccccgacgagaagcttcgc
tgctcggaacgccagtgccgtaaggacaactgtgtgacggtgcccaattcagggcaagag
gacgtggatcgcgacggcatcggagacgcctgcgatccggatgccgatggggacggggtc
ctcaacgagcaggacaactgtaagctggtgcggaacccagaccagcgcaatgcggacggt
gacaagtggggtgatgcttgcgacaactgccggaaccagaagaacgacgaccaaaaggac
acagatcaggacggcaaaggcgatgcctgcgacgacgacatcgacggcgaccggatccga
aattcggtggacaactgcccaagggtgcccaactcagaccagaaggacagcgatggtgat
ggtgtgggggatgcctgtgacaactgtccccagaaaagcaacccagaccagggggatgta
gaccacgactttgtgggagacgcttgcgacagcgaccaagaccaggatggggatgggcac
caggactcacgggacaactgccctacagtaccaaatagtgcccagcaggattcagaccac
gatggccagggtgacgcctgcgacgaggatgacgacaacgacggggtccccgacagtcag
gacaactgtcgcctggtgcccaacccaaaccaggaagacctagaccgtgatggagtgggc
gacgcgtgccagggcgacttcgacgcggacaaggtagtggacaagattgatgtgtgtccg
gagaacgccgaggtcaccctcaccgacttccgggccttccagactgtcgtactggacccc
gagggcgacgcgcagatagatcccaactgggtggtgctcaaccagggtatggagatcgtg
cagacgatgaacagcgaccctggcctggctgtgggctatacggccttcaatggcgtggac
ttcgaaggcacgttccacgtgaacacggtcacagatgacgactatgcgggcttcatcttt
ggctaccaggacagctccagcttttatgtggttatgtggaagcagatggagcagacgtac
tggcaggccaatcccttccgcgcggtagccgaacccggcattcagctcaaggctgtgaag
tcctccacaggccctggggagcagatgcggaacgcgctctggcacacaggggacacagca
tcacaggtgcggctgctgtggaaggacccccgcaacgtgggttggaaggacaagacatcc
taccgctggttcctgcagcaccggccccaagtgggctacatcagagtgcggttctacgag
ggccctgagctggtggctgacagcaacgtggtcctggacacaaccatgcggggtggccgc
ctgggggtcttttgcttctcccaagagaacatcatctgggccaatctacgctaccgatgc
aacgacaccatcccagaggactacgagactcagaggctgctgcaggcctag

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