KEGG   Ailuropoda melanoleuca (giant panda): 100484573
Entry
100484573         CDS       T01329                                 
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:aml01002]
    100484573 (USP13)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aml04121]
    100484573 (USP13)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aml04147]
    100484573 (USP13)
Enzymes [BR:aml01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100484573 (USP13)
Peptidases and inhibitors [BR:aml01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   100484573 (USP13)
Ubiquitin system [BR:aml04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    100484573 (USP13)
Exosome [BR:aml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100484573 (USP13)
SSDB
Motif
Pfam: UCH zf-UBP_var UBA zf-UBP UCH_1 UBA_4 UBA_3 HYPK_UBA
Other DBs
NCBI-GeneID: 100484573
NCBI-ProteinID: XP_002912504
Ensembl: ENSAMEG00000010896
Position
1:complement(83725983..83835375)
AA seq 863 aa
MQRRGALFGMPGGSGSRKMAAGDIGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKIFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPNGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSG
GNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHG
TENGLRDNDIKPRVSEWEVIQETGMKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQ
QNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSIDMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSEIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASAGASVFG
ATGLDNQPPEEIVAIITSMGFHRNQAVQALRATNNNLERALDWIFSHPEFEEDSDFVIEM
ENNANANIISEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDH
RVCASERPPKDLGYMYFYHRVPR
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgcagcgccggggcgccctgttcggcatgccgggcggcagcggcagcaggaagatggct
gcaggagacatcggcgagctgctggtgcctcacatgcccacgatccgcgtgcccaggtcg
ggggacagggtgtacaagaacgagtgcgccttctcgtacgactcccccaattctgaaggt
ggactctatgtatgcatgaatacatttttggcctttggaagggaacatgttgaaagacat
tttcgaaaaactggacagagtgtatacatgcacctgaaaagacacgtgcgagagaaggta
agaggggcatctggtggagctttaccgaaaaggaggaattccaagatttttttagatcta
gatactgatgacgatttaaatagcgacgattatgaatatgaagatgaagccaaacttgtt
atattcccagaccactatgaaatagcactaccaaatattgaggagttaccagccctggta
acaattgcttgtgatgcggttctcagctcaaaatctccatatagaaagcaggacccagac
acatgggaaaatgaattgccagtatccaaatacgccaataaccttacccagttggacaat
ggagtcaggattcctccaaatggttggaagtgtgccaggtgtgacctgcgggaaaacctc
tggttgaatctgaccgatggctccgtgctgtgtgggaagtggttctttgacagctctgga
ggcaacgggcacgcactggagcattacagagacatgggctaccctctagccgtgaagctg
ggaaccatcacccctgatggggcagatgtttattcttttcaagaagaagaaccggttttg
gatcctcatttggccaagcacttagcacattttggaattgatatgcttcatatgcatggg
acagagaacgggcttcgggacaatgacatcaagcctcgggtcagcgagtgggaagtgatc
caggagacagggatgaagctgaaacccatgtatggccccgggtacacggggctcaagaat
ctgggcaacagctgctacctgagttccgtcatgcaggccatcttcagcatcccagaattc
cagagagcgtatgtagggaatcttccaagaatatttgactactctcctttagatccaaca
caggacttcaacacacagatgactaagttaggacatggccttctctcgggccagtattca
aaacctccagtgaaatctgaactcattgaacaggtgatgaaggaggaacacaagcctcaa
cagaatgggatctctccacgcatgtttaaggcctttgtaagcaagagccaccccgaattc
tcctctaatagacagcaggatgcccaggagtttttcttgcacctggtgaatctagtagag
aggaaccgcattggctcagaaaacccaagtgatgtttttcggtttttggtggaagaacgt
attcagtgctgtcagacgcgcaaagttcgctacacggagagggtggattacctgatgcag
ttacctgtggccatggaggcggcaaccaacaaggatgagctgattgcctatgagttaacg
agaagggaagcggaagcaaacagaagaccccttcccgagttggttcgtgccaagataccc
tttagtgcctgccttcaggccttttctgaaccagagaacgtagatgatttctggagcagc
gccctacaagcaaagtctgcgggtgtgaaaacatctcgctttgcctcattccctgaatac
ttggtagtgcagataaagaagttcacttttggtcttgactgggttcccaaaaaatttgat
gtttctattgatatgccagacctacttgatatcaaccatctccgagccagggggttacag
ccaggagaggaggagcttccggacatcagcccccctatagtcattcccgatgactcaaaa
gatcgcctgatgaatcaactgatagacccctcagaaattgatgagtcatcagtgatgcag
ctggccgagatgggtttccccctagaagcgtgtcggaaggctgtgtactttactggaaat
atgggagctgaagtggccttcaactggatcatcgttcacatggaagagccagattttgcc
gaaccgctgaccatgcctggttatggaggagcagcttctgctggagcctctgtttttggt
gctactggactggataaccaacccccggaggaaattgtagctatcattacctccatggga
ttccatcgaaatcaggctgttcaggcgctgcgagccacgaataataacctggaaagagca
ctggattggatctttagtcaccctgagtttgaggaggacagtgactttgtgattgagatg
gagaataacgccaatgcaaacattatttctgaggccaagcctgaaggacctagagtcaaa
gatggatctggaatgtatgaattatttgcattcatcagtcacatgggaacatctacaatg
agtggccattatgtttgccatattaaaaaggaaggaagatgggtgatctacaatgaccac
agagtgtgtgcctcagagaggccccccaaggacctgggctacatgtacttttaccacagg
gtgccacgctga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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