KEGG   Ailuropoda melanoleuca (giant panda): 105240457
Entry
105240457         CDS       T01329                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04151  PI3K-Akt signaling pathway
aml04510  Focal adhesion
aml04512  ECM-receptor interaction
aml04820  Cytoskeleton in muscle cells
aml04974  Protein digestion and absorption
aml05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:aml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    105240457 (COL9A3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105240457 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105240457 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105240457 (COL9A3)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    105240457 (COL9A3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    105240457 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:aml00535]
    105240457 (COL9A3)
Proteoglycans [BR:aml00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   105240457 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 105240457
NCBI-ProteinID: XP_034497457
Position
13:complement(46039922..46061436)
AA seq 715 aa
MPRHLVDEPRTLPCPRLAGSAAARAAPPPGRHNVAFVPQGSRGAVAQPLPARGWRQQIPL
ARGLGGGLQGRLGLGGPPGARLQSRSGPRRRGHCWADPRPTRGTCPTGEGGKARLHNDVS
PFQKVGPQGPPGPQGPPGKPGKDGIDGEVGPPGLPGSPGPKGAPGKPGKPGEAGLPGLPG
VDGLTGQDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGESGVPGGVGLRGPPGP
SGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPAICPPGPPGPPGMPGFKGPTGYKGEQGE
VGKDGEKGDPGPPGPAGIPGTVGLQGPRGLRGLPGPAGPPGDRGPIGFRGPPGIPGAPGK
VGDRGERGPEGFRGPKGDLGRPGLKGVPGLAGPGGEPGMPGKDGRDGVPGLDGEKGEAGR
NGAPGEKGPNGLPGLPGRAGSKGAKGELGQAGELGEAGPSGPGGAAGPKGDQGVAGSDGI
PGDKGELGPGGPVGPKGESGSRGELGPKGIQGPNGTSGVEGLPGPPGPVGFPGVQGVPGI
TGKPGVPGREASEQHIRELCGGMLSEQIAQLAAHLRKPLAPGSAGRPGPAGPPGPPGPPG
SIGHPGARGPPGYRGPTGDLGDPGPRGAPGDRGDKGSAGTGLDGPDGDQGLQGPQGVPGV
SKDGRDGAHGEPGPPGDPGLPGAVGAQGTPGICDTSACQGAVMGGGGEKSGSRSS
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgccgagacacctcgtggatgagcccaggacgttgccctgtcctcgcctggccgggtcg
gccgctgccagggccgcgccgccaccagggaggcacaatgtcgcctttgttccccaaggc
tcccgtggggccgtggcacagcccctcccggcccgaggatggaggcagcagataccgctg
gctcgaggcttgggggggggtctccaaggcaggcttgggttgggggggcccccaggagcc
aggctccagagccgctctgggcccaggaggaggggacactgttgggctgacccgaggccg
accagggggacctgccccacgggagagggtgggaaggcacggctgcataacgacgtttct
ccatttcagaaagtgggacctcaaggcccccctggcccccaagggccacctgggaagccg
ggcaaggatggcattgatggagaagttgggcctcctggtctgcccgggtccccgggacca
aaaggggccccagggaaaccagggaaaccaggagaggccgggctgccgggactgcctggc
gtggacggtctgacagggcaggatggaccccccggccccaagggcgcgcctggagagcgg
ggaagtctgggacccccggggcctcccgggctggggggcaaaggcctccctggacccccc
ggagaggcaggagagagtggcgtcccaggtggagtgggcctccggggccccccgggaccc
tccggactaccaggcctccctggccccccggggcctcctggaccccccggtcaccctggg
gtcctccctgaaggcgccactgaccttcagtgcccggccatctgccccccaggccctccc
ggccccccaggaatgccagggttcaaggggcccaccggctacaaaggggagcaaggagag
gtcggaaaggacggcgagaagggtgatcctggcccccctgggcccgcgggcatcccaggc
actgtggggctgcaggggcctcggggacttcgaggcctgccggggccggctggaccccca
ggggatcggggtcccattggattccgaggaccaccagggatcccaggagcccccgggaaa
gtgggtgacagaggcgagaggggcccagagggtttccgcggccccaagggtgaccttggc
agacctggtctcaaaggagtccctgggctagcagggccgggcggagagccgggtatgcca
ggcaaggacggccgggatggtgtgccgggactcgacggtgagaagggagaggccggtcgc
aacggtgccccaggagagaagggtcccaatgggctgccgggcctcccgggacgagcaggg
tccaagggcgcgaagggagaactgggccaagctggagagctgggggaggctggcccctca
ggcccgggaggagccgctggccctaagggagaccagggagttgcaggttccgatggcatt
cctggggacaaaggagagctgggtcccggtggtccggtcggacccaaaggagagtctggc
agtcgaggggagctgggcccgaagggcatccagggtcccaacggcaccagtggcgtcgag
ggcctcccaggcccacccggccccgtgggcttcccgggagtacaaggtgtgcctggcatc
actgggaaacccggagtcccgggccgagaagccagtgagcagcacatcagggaactgtgc
ggagggatgctcagtgaacaaattgcacagctagctgctcacctgaggaagcctttagca
cccggatccgcaggtcggcctggtccagctgggcccccgggccccccgggccccccgggc
tccatcggccaccccggtgcccgagggccccctggataccgtggtcccaccggagatctg
ggagacccagggcccagaggggctccgggagacagaggagacaaaggctcggcgggcacg
ggtctggacggaccggacggagaccaggggctgcaaggaccgcaaggcgtgccaggcgtt
agcaaagacggccgcgatggggcccacggcgagcccgggcctccaggtgatcctggcctc
cctggtgctgtcggtgctcaggggacccccggcatctgtgacacctcggcctgccaagga
gccgtgatgggaggcggcggggaaaaatcaggttctagaagctcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (65)   
   KEGG ORTHOLOGY (1)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (77)   

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