KEGG T02190: AMES

Amycolatopsis mediterranei S699: AMES_4100

Entry

AMES_4100 CDS T02190

Gene name

lig

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

amm Amycolatopsis mediterranei S699

Pathway

amm03410	Base excision repair
amm03420	Nucleotide excision repair
amm03430	Mismatch repair
amm03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:amm03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:amm03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:amm03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:amm03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

399537919

NCBI-GeneID:

13415104

UniProt:

G0FQ73

Position

4563115..4564179

AA seq 354 aa
MPPVRPMLAKAVHEVPRDPGLLYEPKWDGFRCVVFRDGDEIELGSRNDRPLTRYFPELVE
LLAAALPPRCVVDGEIVLVTPAGLDFEVLQLRLHPAASRVRKLAEETPASFIAFDLLALG
DTDLTEEPFRERRKQLESVLSTAAEGLQRVHLTPLSDDPAQAEDWFTRFEGAGFDGVMAK
PGDLPYEQDKRVMLKVKHERTADCVVTGFRWHKDGAGVGSLLLGLFDDEGVLHHVGVASS
FTKARRAELVDELAPLRENALEGHPWRNWAEYEPQPGRQPGANSRWAPQKDLSWEPLRPE
WVAEVRYEHLQGGRFRHGGRLVRFRPDRTPESCTYAQLDEAPPAELAKLLGEAR

NT seq 1065 nt +upstreamnt +downstreamnt
atgccgccggtgcggccgatgctcgcgaaagccgtgcacgaggtgcctcgtgacccgggg
ctgctgtacgagcccaagtgggacgggttccgctgcgtcgtgttccgcgacggcgacgag
atcgaactcggctcccgcaacgaccgcccgctgacccgctacttcccggagctggtggag
ctgctggccgccgcgctgccgccccgctgcgtcgtggacggcgagatcgtgctggtcacg
ccggccgggctcgacttcgaggtgctgcagctgcggctgcacccggcggcttcccgcgtg
cgcaagctcgccgaggagacgccggccagcttcatcgccttcgacctgctcgccctcggc
gacaccgatctcaccgaggagccgttccgcgagcggcgcaagcagctcgaaagcgtgctg
tccacggccgccgaagggctgcagcgcgtccacctgaccccgctgagcgacgatccggcg
caggcggaggactggttcacccggttcgagggcgcgggcttcgacggcgtcatggccaag
cccggcgacctgccgtacgagcaggacaagcgcgtcatgctgaaggtcaagcacgagcgc
acggccgactgcgtcgtcaccggcttccgctggcacaaggacggcgccggcgtcggttcg
ctgctgctcgggctgttcgacgacgagggtgtcctgcaccacgtcggcgtggccagcagc
ttcaccaaggcgcggcgggccgagctggtcgacgagctggcgccgctgcgcgagaacgcg
ctcgaaggccatccgtggcgcaactgggccgagtacgaaccgcagcccggtcgccagccg
ggcgccaacagccggtgggcgccgcagaaggacctctcgtgggagccgctgcgcccggaa
tgggtggcggaggtccgctacgagcacctgcagggcggccggttccggcacggcgggcgg
ctggtccgcttccggcccgaccgcaccccggagtcctgcacgtacgcccagctcgacgag
gcaccgcccgccgagctcgcgaagctgttgggggaggcgcggtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system