KEGG   Amycolatopsis mediterranei S699: AMES_7679
Entry
AMES_7679         CDS       T02190                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
amm  Amycolatopsis mediterranei S699
Pathway
amm00300  Lysine biosynthesis
amm00470  D-Amino acid metabolism
amm01100  Metabolic pathways
amm01110  Biosynthesis of secondary metabolites
amm01120  Microbial metabolism in diverse environments
amm01230  Biosynthesis of amino acids
Module
amm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:amm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AMES_7679 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AMES_7679 (lysA)
Enzymes [BR:amm01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     AMES_7679 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AFO81212
Position
complement(8582908..8584338)
AA seq 476 aa
MAHPAGPRHADVYTHADTSGHQPSGVEELDKLPAKVWPRNTFRAADGVVRIAGVDVRELA
EQHGTPLFVVDEADFKSRCADYAEAFDDPSLVHYASKAFLSIEIARWVAEQGLSLDVCSG
GELAVAQRADFPAERITFHGNNKSPAELEAAVVAGVGTVVLDSYFEIARLADIAARHDVV
QSVLIRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNARSLKLVGLHSHIG
SQIFDADGFEVAARRVVGLLADLAKEHGPELLDQLSLVDLGGGFGIAYTEKDNPPPPAQM
ITQIREIVRKECAYAGLPVPRIAGEPGRAIAGPGTITLYEVGTIKDVSLGDESARRYVSV
DGGMSDNIRTALYDAVYDVRLVSRSAGDNEQPVPAVLSRVVGKHCESGDIVVRDCWLPDT
LAPGDLLAVAATGAYCYSMASTYNRMPRPAVVAVRNGSSRLLLRRETTDDMLRLEV
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggcgcaccccgcgggccccaggcacgccgacgtctacacccacgccgacacttccggg
caccagccgtccggggtcgaggagctcgacaagctgcccgcgaaagtgtggccgcgcaac
accttccgcgccgccgacggtgtcgtccggatcgccggcgtcgacgtccgcgagctcgcc
gagcagcacggcacgccgctgttcgtggtcgacgaagccgacttcaagtcccggtgcgcg
gactacgccgaggccttcgacgacccgtcgctggtgcactacgcgtcgaaggcgttcctg
tccatcgagatcgcccgctgggtggccgagcaggggctgagcctggacgtctgcagcggc
ggcgagctcgccgtggcgcagcgcgccgacttcccggccgagcggatcaccttccacggc
aacaacaagtcgcccgccgagctggaagccgcggtcgtcgccggggtcggcacggtggtg
ctcgactcgtacttcgagatcgcccggctggccgacatcgccgcccgccacgacgtcgtg
cagtccgtgctgatccgggtgaccgtcggcgtcgaggcgcacacccacgagttcatcgcg
accgcccacgaggaccagaagttcgggttctcgctggcgagcggcgacgccgccgaggcg
gtccgccgggtgctcaacgcgcgttcgctcaagctcgtcggcctgcacagccacatcggc
tcgcagatcttcgacgccgacggcttcgaggtcgccgcccgccgcgtcgtcgggctgctc
gccgacctggccaaggaacacggccccgagctgctcgaccagctgagcctggtcgacctc
ggcggcggcttcggcatcgcctacaccgagaaggacaacccgccgccgcccgcgcagatg
atcacgcagatccgcgagatcgtccgcaaggagtgcgcctacgcgggcttgccggtgccg
cggatcgccggtgagccgggccgcgcgatcgccggtccgggcacgatcacgctctacgag
gtcggcaccatcaaggacgtctcgctcggcgacgagtcggcgcggcggtacgtcagcgtc
gacggcgggatgagtgacaacatccgcaccgcgctctacgacgcggtctacgacgtccgg
ctggtttcccgctccgcgggcgacaacgaacagccggtaccggccgtgttgtcccgggtc
gtgggaaaacactgtgagtccggcgacatcgtcgtacgagactgctggctgcccgacacg
ctggctcccggcgacctgctggcggtcgcggcgaccggcgcgtactgctactcgatggcg
agcacgtacaaccggatgccccgcccggccgtggtcgccgtgcgcaacggcagctcacgg
ctgctgctgcggcgggagacgaccgacgacatgctgcgcctggaggtctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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