KEGG   Amycolatopsis mediterranei S699: RAM_00660Help
Entry
RAM_00660         CDS       T01822                                 

Definition
DNA-formamidopyrimidine glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
amn  Amycolatopsis mediterranei S699
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:amn00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    RAM_00660
Enzymes [BR:amn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RAM_00660
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RAM_00660
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
139578..140438
Genome map
AA seq 286 aa AA seqDB search
MPELPEVEALAHHLRENAVGRTIFRIDVASLSVLKTATPPWTELHGREITGATRHGKHLD
VVAGDLHLVVHLARAGWLRWSDGLAAAPLKPGKGPISLRVHLESATGPGFDLTEAGTKKG
LAVWVVKDPQEIASVARLGPDALAVDAAQLRELFAGKNTRLKWALTDQSLLAGIGNAYSD
EIMHRAKLSPYATIGKLDEGALETLAEAIHDIETDAVERSVGQKAARLKGEKRSGLRVHA
RTGLPCPVCGDTIREISFADKSFQYCPTCQTGGKPLADRRMSRLLK
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagctacccgaggtcgaagcactggctcaccacctgcgcgagaacgccgtgggc
cggacgatcttccgcatcgatgtcgcatcgctgagcgtcttgaagacggccaccccgccg
tggaccgagctgcacggccgcgagatcaccggcgcgacccggcacggcaagcacctcgac
gtcgtggccggtgacctgcacctggtcgtccacctggcgcgggcgggctggctgcgctgg
tccgacggtctcgccgcggccccgctgaagccgggcaagggcccgatctcgctgcgggtg
cacctcgagtccgccaccgggccgggcttcgacctcaccgaagcgggcacgaagaagggc
ttggcggtgtgggtcgtcaaggacccgcaggagatcgcgagcgtggcgcggctgggtccg
gacgcgctcgccgtggacgccgcccagctgcgtgagctgttcgccggcaagaacacccgg
ctgaagtgggcgctcaccgaccagtcgctcctcgccgggatcggcaacgcctactccgac
gagatcatgcaccgcgcgaagctctcgccgtacgccacgatcggcaagctcgacgagggg
gccctggagacgctcgccgaggcgatccacgacatcgagaccgacgccgtcgagcggtcg
gtggggcagaaggcggcccggctgaagggggagaagcggtcgggcctgcgggtccacgcg
cgcaccgggctgccgtgccccgtctgcggcgacacgatccgcgaaatatccttcgccgac
aagtcgttccagtactgcccgacctgccagacgggcggcaagccgctcgccgaccgccgg
atgtcgcggctgctgaagtag

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