KEGG T01822: RAM

Amycolatopsis mediterranei S699: RAM_26505

Entry

RAM_26505 CDS T01822

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

amn Amycolatopsis mediterranei S699

Pathway

amn03410	Base excision repair
amn03420	Nucleotide excision repair
amn03430	Mismatch repair
amn03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:amn03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:amn03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:amn03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:amn03450]

SSDB

Motif

Pfam:

DNA_primase_S

Other DBs

NCBI-GI:

384150419

NCBI-GeneID:

12123929

UniProt:

G0FQR0

Position

complement(5774886..5775749)

AA seq 287 aa
MKTSHPDKVFYPEDGLTKGDVVEYYRAVADVMLPHLRGRPLTLRRFPDGIGKPGWFQKHP
GEHFPDSIRVERVPRRGGGTDEYVVCEDAATLEYLANQGTVEFHVWLSTADAPERPDRLV
LDLDPPDGTPVTELRTVARRIRDHYERVGLTAFVQATGGRGFHVLAPLDAKSETDVVLEL
SRALADRVAGDDPDRLTTAQRKDQRGDRIFLDANRNGYAQTFVAPYSLRARPGAAAATPL
DWRELGTADPAGWSLVKEKRRLARKEDPWRDLDEHAGSAEAALKQLG

NT seq 864 nt +upstreamnt +downstreamnt
gtgaagacttcccacccggacaaggtgttctaccccgaagacgggctcaccaagggcgac
gtcgtcgagtactaccgcgccgtcgcggacgtcatgctgccgcacctgcgcggccgtccg
ctgacgctgcggcgcttccccgacggtatcgggaagccgggctggttccagaagcacccg
ggggagcacttcccggactcgatccgggtcgagcgcgttccccggcgcggcggtggcacc
gacgagtacgtcgtgtgcgaagacgccgcgacgctggagtacctggcgaaccaggggacg
gtcgagttccacgtctggctgtccacagcagacgccccggagcggcccgaccggctggtg
ctcgacctcgacccgccggacggcacgccggtcaccgagttgcgcaccgtcgcgcggcgc
atccgcgaccactacgagcgggtcggcctgacggcgttcgtccaggcgaccggcggccgc
gggttccacgtcctcgcgccgctggacgcgaagtcggagaccgacgtggtgctggagctc
tcgcgcgccctcgccgaccgggtcgccggcgacgacccggatcggctgaccacggcccag
cgcaaggaccagcgcggcgaccggatcttcctggacgccaaccgcaacgggtacgcgcag
acgttcgtggcgccgtactcgctgcgcgcccgcccgggtgcggcggccgcgaccccgctg
gactggcgggagctgggcaccgcggacccggccggctggtccctggtcaaggagaagcgg
cggctggcccgcaaggaggatccttggcgggacctggacgagcacgcggggtcggccgag
gcggcgctgaagcagctcgggtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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