KEGG T01822: RAM

Amycolatopsis mediterranei S699: RAM_26870

Entry

RAM_26870 CDS T01822

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

amn Amycolatopsis mediterranei S699

Pathway

amn03410	Base excision repair
amn03420	Nucleotide excision repair
amn03430	Mismatch repair
amn03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:amn03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:amn03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:amn03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:amn03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M

Other DBs

NCBI-GI:

384150492

NCBI-GeneID:

12119721

UniProt:

G0FTG4

Position

5851633..5852700

AA seq 355 aa
MADKLEEYRGKRARDRTSEPWPDGPPAPGDNDLFVIQEHHATRLHWDFRLERDGVLVSWA
VPKGLPLSPGVPRLAVHTEDHPMEYLTFSGEIPAGEYGGGRMTVWDTGKYETLHWNDHKV
EVVFHGERARGKYLFTNRHDEDDRDWTLRRLDPAEPGHEDAPEFVEPMTAVPGELPADDD
EWAYEFAWGGLRTMLLVCGGRVTAHDETGADVTARYPELHKLGEQLGSTEVLLDGEVVVV
KDGKPDPDGLDERRRADGAAAKRLKASCPVFYFASDVLHLEGRATLELPYTKRRELLDGL
PIEDRHWQVPRYYLGGGEAVAGASRQHGLPGVVAKRADSPYQPGGGPGDWLLIRN

NT seq 1068 nt +upstreamnt +downstreamnt
atggccgacaaactcgaggaataccgcggcaagcgcgctcgcgaccgcacctccgagccc
tggccggacggcccgcccgcccccggggacaacgacctcttcgtcatccaggagcaccac
gccacccggctgcactgggacttccggctggaacgcgacggggtgctcgtgtcgtgggcg
gtgccgaagggcctgccgctctcccccggcgtgccgcggctcgccgtgcacaccgaagac
caccccatggagtacctgaccttctccggcgagatccccgcgggcgagtacggcggcggc
cggatgaccgtgtgggacaccgggaagtacgaaaccctgcactggaacgaccacaaggtc
gaggtggtcttccacggcgaacgcgcgcgcggcaagtacctgttcaccaaccggcacgac
gaagacgaccgcgactggaccctgcggcgcctcgaccccgccgaacccggccacgaagac
gcgcccgagttcgtcgagccgatgacggcggtcccgggcgagctgcccgcggacgacgac
gagtgggcctacgaattcgcctggggcggcctgcgcacgatgctgctggtgtgcggcggc
cgcgtcaccgcgcacgacgaaaccggcgccgacgtcacggcgcgctatcccgagctgcac
aagctgggcgagcagctcgggtccacggaagtgctgctggacggcgaagtcgtcgtggtc
aaggacggcaagcccgacccggacggcctcgacgagcgccgccgggccgacggtgccgcc
gccaagcggctcaaggccagctgcccggtcttctacttcgcttccgacgtcctgcacctc
gagggccgggcgacgctcgagctgccgtacacgaagcgccgggagctgctcgacggcttg
ccgatcgaggaccggcactggcaggtcccgcggtactacctgggcggcggcgaggccgtc
gcgggcgccagccgccagcacggcctgcccggcgtcgtcgcgaaacgggccgacagcccg
taccagccgggtggcggccctggcgactggctgctgatcaggaactga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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