KEGG T00617: AM1

Acaryochloris marina: AM1_5034

Entry

AM1_5034 CDS T00617

Definition

RecD/TraA family helicase

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

amr Acaryochloris marina

Pathway

amr03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:amr03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 HHH_5 PIF1 Helicase_RecD PhoH HHH_2 AAA_22 DUF2075 UvrD_C T2SE Mg_chelatase AAA_28 UPF0079 AAA_16 AAA_5 Zeta_toxin AAA UvrD-helicase HHH Sigma54_activat IstB_IS21 AAA_10 TrwB_AAD_bind NACHT

Other DBs

NCBI-GI:

158338142

NCBI-GeneID:

5683831

UniProt:

B0C5Y8

Position

5080585..5082816

AA seq 743 aa
MTYEAAHPTHPPTEQLQGVVERLTYHSDESGYTVARFKAPRTRELITIVGSFANIQAGQT
LQVQGIWRDHPKYGAQFQVKQYQETKPATLTGIEKYLGSGLIKGVGPVTAKRIVAHFGLE
TLDIIENQIERLVEVPGIAKKRVKLIQTAWDSQKTIKEVMVFLQGHGVSTTYAVKIFKQY
GDEAIDIVTQNPYRLATDVYGIGFITADQIARSLGIPPHSEYRYRSGLLHVLSESADEGH
CYLPQPELITRAVKRLALPEYQPKPDQVEYLIHAMVADAELIVEQFEREDATELLCYAPP
FFRAEFHLSRRLLQLLANPLEVDQGRVRRWLDRFMEQTNVHLSEQQQQAVELAASQRVVI
LTGGPGTGKTFTTRTIVALWKAMGKEIVLASPTGRAAQRLSEVTGHEAKTIHRLLEFDPK
TMKFQRDVDHPIPADAVVIDEASMLDLFLANSLIKAIDTNAQLLLVGDTDQLPSVGPGNV
LLDLITAQRIPVMELTEVFRQAQASQIIQNAHQINQGKFPHLESVSPAPKTDCLWLGAPE
PEQGQQAIQELINDLIPQLGYVAARDVQVLCPMTRGEVGTRKLNQVLQALINPPSPSKAE
LTRGGLILRVGDRVLQQVNDYNREVFNGDMGVIEAINLEEVAVTVRYAERSVSYDLADLN
EIGLAWAVTIHKSQGSEYPVVILPMYMQHYIMLSRNLLYTGLTRAKKLAILVGPKNAISM
AIRQVKDKQRYTLLDKRLSFVAQ

NT seq 2232 nt +upstreamnt +downstreamnt
atgacctacgaggccgctcatccgactcatcccccgaccgaacagttacaaggggttgta
gagcggctaacctatcattccgatgaatcgggatataccgtggcccgcttcaaagcccct
agaacccgtgagttaatcaccattgtgggcagctttgctaatatccaagcgggccaaacc
ctccaagttcaggggatttggcgggatcatcctaaatacggcgctcaatttcaagtcaaa
caataccaagaaacgaaacccgctaccctgacggggattgaaaagtacctcgggagtggc
ttaattaagggcgtgggtccggtcaccgccaagcgcatcgtcgctcattttggcctagaa
accctggatattattgagaaccagattgagcgcctagttgaagtccccggcattgccaag
aagcgagtcaaactgattcagaccgcttgggacagccagaaaaccatcaaagaggtgatg
gtgttcctccagggccatggtgtctccactacctatgctgtcaaaatctttaagcagtat
ggagacgaagccatcgatatcgtcacccagaatccctaccgactggcaacggatgtctat
ggcattggctttatcactgccgatcaaattgcccgtagcttaggcattcctcctcactca
gagtatcgctatcgcagtggcctcctacatgtccttagcgagtccgccgatgaagggcat
tgttatctacctcaacctgagctgatcactcgggccgtaaagcgattggccctccccgaa
tatcagcccaagcccgatcaagtggaatatttgatccatgccatggtcgcggacgctgag
ctgattgttgaacagtttgaacgggaggatgcaacggaattgttgtgctatgctcctccc
ttctttcgagcggagtttcatttgtctcgccgattactccaattactcgccaatccccta
gaagtcgatcagggtcgagtccgtcgttggctcgatcggtttatggaacaaacgaatgtc
catctctcggagcaacagcagcaggctgtggagttggccgctagccagcgagttgtcatt
ctcacgggtggaccgggcacggggaagacctttaccacccggaccattgtcgccctctgg
aaagccatggggaaagagattgtattggcttctcccaccggacgagctgcccagcgactc
agcgaagtaacgggtcacgaagcgaaaaccatccatcgccttttagagtttgaccctaaa
accatgaagtttcagcgggatgtagaccaccccattcctgctgatgcggtggtgattgat
gaagcatccatgctggatttgtttctagccaattccctaattaaagccattgataccaat
gcccaactgttgctcgtgggggatacggatcagctacccagcgtcggacccggaaatgtg
ctgctggatctgattaccgcccagagaattcccgtcatggaactaacagaggtttttcgt
caagcccaagccagtcaaattatccaaaatgctcatcagattaaccaaggcaagttcccc
catctagagtctgtcagccctgcgcccaagacggattgtctctggcttggggcacctgag
ccggagcagggtcagcaagcgattcaagaactcatcaatgatctgattccgcaattggga
tatgtggcggcacgagatgtgcaggtcctttgtcctatgaccagaggagaggtggggact
cgcaagctgaatcaagttctgcaggcattgattaatccccctagtccgagtaaagctgag
ttaacccgaggggggctgattcttagggtgggcgatcgcgtacttcaacaggtcaatgat
tacaatcgcgaggtcttcaatggcgatatgggggtgatcgaggcgattaatctagaagag
gttgccgtgacggttcggtatgctgagcggtctgtttcttatgatctggcagacttaaat
gaaatagggttggcttgggccgtcacgattcataagagccaggggtcagaatatcccgtt
gtgatcctgcctatgtatatgcagcattacattatgctgagccgcaatctgctctacaca
ggtttgacgagggctaagaaactggcgattctagtgggtcccaaaaatgcaatcagcatg
gcgattcgacaggtgaaggataagcagcgatataccttgctggacaagcggttgagcttt
gttgctcagtga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (29)   
   Pfam (29)   
All databases (38)   

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