KEGG   Acaryochloris marina: AM1_5591
Entry
AM1_5591          CDS       T00617                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
amr  Acaryochloris marina
Pathway
amr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AM1_5591 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amr03019]
    AM1_5591 (recQ)
   03400 DNA repair and recombination proteins [BR:amr03400]
    AM1_5591 (recQ)
Enzymes [BR:amr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AM1_5591 (recQ)
Messenger RNA biogenesis [BR:amr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AM1_5591 (recQ)
DNA repair and recombination proteins [BR:amr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AM1_5591 (recQ)
SSDB
Motif
Pfam: RQC HTH_40 DEAD HRDC Helicase_C RecQ_Zn_bind HTH_5 MarR_2 Helicase_Sgs1 DNA_processg_A DUF742 GerE ResIII
Other DBs
NCBI-ProteinID: ABW30542
UniProt: B0CF26
Position
5649251..5651461
AA seq 736 aa
MTLSSIAPGSDFKSLEEALKHYFGYDQFRVGQRPVIEAALQRQDLMVVMPTGGGKSLCFQ
LPGLLLPGLTVVISPLIALMQDQVTTLQVNDIPATFLNSSIDAATARQRISEIYSGKIKL
LYVAPERLLNESFLNLLDQVQAQVGLAAFAVDEAHCVSEWGHDFRPEYRRLAEVRQRYTQ
VPVYALTATATERVRQDIIQQLQLRQPFVHVASFNRPNLYYEVRPKSRQVYADLYREIRQ
HGQDSGIVYCLSRREVNEISARLQADGISALPYHAGMSDSARTLNQERFIRDDVQVMVAT
VAFGMGIDKPDVRFVIHYNLPRNIEGYYQESGRAGRDGEPSKCLLFFSTKDIHTIEWLIE
RKADPETGNPLENEQRIARQQLRQVIDYAESTVCRRTVQLGYFGETFAGDCGGCDNCCHP
KPVEDWTIPAQKLLSCVARCQERYGMSYVIDVLRGSKNKKVLQRRHDQLSTYGIGKDKTV
DQWRLLGRTLLHQGLVTETTDGYPVLKLNELSWEVLRHQRSVFVPVPVAPTQDRPNARRE
EAEALFQQLRELRKELADQQSVPPYVIFADSSLKLMAQQQPQTMVEFAKISGVGKRKLEQ
YGQQFTAAIRTHRQEQGLPVVSEADAAELEVQPSTLKLSNTVLATFQLYKQGKSLTEITD
ERELKASTISIHLEDLIEAGHIEEIEALVECDRKQTIVEIIDRIGPISLTKIREQLGNNY
SYEEIRLVRAWWQRQQ
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgaccttgagttctattgcacctggttccgactttaagtccctagaagaagccctcaaa
cactattttgggtatgaccagttccgggttgggcagcgacccgtcattgaagcggcactt
cagcggcaggatctgatggtggtgatgccgaccgggggtggcaaatccctctgctttcag
ctcccagggttactcttgcctgggttgacggtggtgatatcccctttaattgccctgatg
caggatcaggtcacaactttgcaggtcaatgatattccagccacttttttaaatagcagt
attgatgctgccacagctcggcaacggatttcggagatttattctgggaaaatcaagctg
ctgtatgttgcgccggaacggttgctgaatgagtccttccttaatttattggatcaggtg
caggcccaggtgggattggcggcgtttgcggtggatgaggcccattgtgtttctgagtgg
ggacatgattttcggcctgagtatcgtcgtttggccgaggtacggcaacgatatactcaa
gtccccgtgtatgccttaacggcaacggcgacggagcgggtgcgccaagatattattcag
caactgcagttgcgacagcccttcgttcatgttgccagctttaatcgtcctaatctctat
tacgaggttcgtcccaagtcccggcaggtctacgccgatctctatcgcgagattcgtcag
cacggccaagattcagggattgtctattgtttgagtcgacgagaagtgaatgaaatttct
gctcgcctccaggctgatggaattagtgccttgccttaccatgcgggcatgagtgatagt
gcccgtaccctcaaccaggaacggtttattcgagatgatgttcaggtgatggtggcgacg
gttgcctttggcatgggcattgataagccggatgtgcggtttgtgattcactacaacttg
ccccgcaatatcgaggggtattaccaggagtcaggacgagcaggtcgagatggtgaaccg
tctaaatgtctgctgttttttagtacgaaggatattcacaccattgaatggctgattgag
cgtaaggccgatccagagacgggtaaccccttagaaaatgaacagcgcattgcccgccaa
cagctccggcaagtgatcgattatgcagaaagtaccgtctgtcggcgaacggtgcagctg
ggctattttggcgaaacctttgcaggagactgtgggggctgtgataactgttgccatccc
aagccggtggaagactggacgattccggctcaaaaactgttgtcttgtgtagcccgctgc
caggaacggtatgggatgagctatgtcattgatgttttacggggatccaaaaataaaaag
gtcttacagcgccgccatgaccagctttctacctacggaattggtaaagataaaacggtg
gatcaatggcggttgttagggcggactttgctacatcaaggtttggtgaccgaaaccact
gatggttatccggtgcttaagttgaatgaactgagctgggaagtgttgcggcatcagcgg
tccgtattcgttcctgtgcctgtcgctccaactcaagataggcccaacgcccgtcgggaa
gaggctgaagctctatttcaacagttacgagagctgcgcaaggagttggctgatcagcaa
tccgttcccccttacgtgatttttgcggattccagtttgaagctgatggcccagcaacaa
ccccaaaccatggtggagtttgccaagatttcgggagtaggtaagcgcaagctagaacaa
tatggtcagcaattcacggcagcgattcgcacccatcgacaggagcagggcttgcctgtg
gtgagtgaggcagatgcggctgagttggaggtgcaaccgtcaactctaaagttatctaat
acggttttggcaacctttcaactttataaacaagggaaatctctgactgaaattacagat
gagcgagagttgaaggccagcacaatctccatccatttggaagatctgattgaggcaggc
catattgaggagattgaggcgttagtagagtgcgatcgcaaacagaccatcgtcgaaatc
attgatcgtattggccccatttcccttacaaaaattcgagagcagctgggaaacaactat
tcctatgaggaaattcggttagtcagagcctggtggcagcgccaacagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (43)   

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