KEGG T00617: AM1

Acaryochloris marina: AM1_A0091

Entry

AM1_A0091 CDS T00617

Definition

RecD/TraA family helicase

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

amr Acaryochloris marina

Pathway

amr03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:amr03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 HHH_5 PIF1 PhoH Helicase_RecD HHH_2 AAA_28 UvrD_C DUF2075 AAA_22 T2SE Mg_chelatase UPF0079 AAA_16 UvrD-helicase IstB_IS21 AAA Sigma54_activat HHH NACHT AAA_10 AAA_5 rOmpB

Other DBs

NCBI-GI:

158339743

NCBI-GeneID:

5685238

UniProt:

A8ZKA0

Position

pREB1:complement(83939..86200)

AA seq 753 aa
MSNGSATMSSPPIEQLQGVVERLTFHSEESGYTVARLKAPRTRELITIVGSFANIQAGQT
LQLQGIWRDHPKYGPQFQVKQYKETKPATLTGIEKYLGSGLIKGVGPVTAKRIVAHFGLD
TLDIIEHHIDRLSEVPGIAKKRVKMIQTAWDSQKAIKEVMVFLQGHGVSTTYAVKIFKQY
GDEAIETVTHNPYRLATDVYGIGFITADQIARSLGISPHSEYRYRSGLLHVLSESSEEGH
CYLPQPQLIDRAVKQLTLPEYHPKPDQVEYLIHAMISDAELIVEQIERETSTELLCYAPP
FFRAEFHLSRRLLHLLAHPIKVDKNRVRSWLERFMAQTDVNLSQQQQQAVELAASERVVI
LTGGPGTGKTFTTRTIVALWKAMGKEIVLASPTGRAAQRLSEVTGHEAKTIHRLLEFDPK
TMKFQRDSERTLVADAVVIDEASMLDLFLANSLIKAIGPETQLLLVGDTDQLPSVGPGNV
LLDLITAKQIPVMELTEIFRQAQASHIIRNAHRINQGQFPQLESVSPSPMSDCLWLGAPE
PEQGVQAIQELINDLIPQLGYVPARDVQVLCPMTRGEVGTRKLNQVLQALINPPHPDKAE
LTRGGLTLRVGDRVLQQVNDYNREVFNGDMGVIEAINLEEIAVTVQYAERSVSYDLADLN
EIGLAWAVTIHKSQGSEYPVVILPMYMQHYIMLSRNLLYTGLTRAKKLAMLVGPKNAISM
AVRQIKDRQRYTLLERRLGGVPKANESLASAIL

NT seq 2262 nt +upstreamnt +downstreamnt
atgtccaatggttctgccacgatgagttcaccccccattgagcaactacaaggggtcgta
gaacgcttgacctttcattctgaagaatctgggtatacggttgccagattgaaagctccc
agaacccgtgaattgattaccatcgtgggtagcttcgccaatatccaagcgggccaaacc
cttcaactccagggaatatggcgagaccatcccaaatatggtcctcaatttcaggtcaag
caatacaaagaaaccaaacccgccactcttactggaattgagaagtacctcggcagtggc
ttgatcaaaggggtcggccccgtcactgctaaacgcatcgtcgctcactttggtctggat
accctggacatcattgagcatcacattgaccgtctgagtgaagtaccgggcattgcgaag
aagcgagtcaagatgattcagacggcttgggatagccagaaagctatcaaagaggtgatg
gtatttctccaagggcatggcgtctcaacaacttatgccgtcaaaatcttcaagcaatat
ggagatgaggcgattgaaaccgtcacccataacccctatcgactagcgacggatgtttac
ggcattggctttatcacagcagatcagatagcccgcagcttaggtatctcaccccactct
gaataccggtatcgcagtggtcttttacatgttctcagcgaatcatcagaagaagggcat
tgctatcttcctcaaccacaactgattgaccgcgctgtaaagcagctgaccctccctgag
tatcaccctaagccagaccaggtggaatatctgatccatgccatgatctcagatgctgag
ctgatcgttgaacagatagagcgagaaacttcgacggagctgctttgttatgcaccgccg
ttcttccgggctgaatttcacctatcccggcgactcctccacctcttggctcacccaatc
aaggtggataagaaccgcgttcgcagctggctagagcgctttatggcccaaacggatgtt
aatctctctcaacaacagcagcaggcggtggagttggctgctagtgagcgtgtcgtgatt
ctcactggcggaccgggaacgggcaagaccttcacgactcggaccatcgtggcgctgtgg
aaggcgatgggaaaagaaatcgttttagcatctcccacaggccgagccgctcagcgactg
agtgaagtcacgggtcatgaagctaaaaccatccatcgccttttggagtttgaccccaaa
acgatgaagtttcaaagggattcagagcgaaccctagtagctgatgctgtggtcattgat
gaagcgtctatgctggatttgtttttagcaaactctttgatcaaggccattggcccagag
actcaactcttgctcgtgggggatacggaccaacttcccagtgtgggccccggaaatgtt
ttgctggatctgatcaccgctaaacagattcccgtcatggaactgacggagatcttccgc
caagcccaagccagtcacattatccgcaatgcccatcgtattaaccaaggccagttcccc
cagttagaatccgtcagtccatctccaatgtccgattgcctttggttaggagcaccggaa
ccggagcaaggagttcaagccattcaagagttaatcaacgaccttatccctcaacttggg
tatgtgccggcacgggatgtgcaagtcctctgtcccatgacccgtggggaagtggggact
cgcaagctcaaccaagtcttacaagcgttgatcaatcctcctcatcccgacaaggctgaa
ctcacgcgagggggactcacactccgggtgggggatcgagtgctgcaacaggttaatgac
tacaaccgcgaggtcttcaatggcgatatgggagtcattgaggccatcaatctagaagaa
attgccgtgacggttcagtatgcggagcggtcagtctcctacgatttggctgatttaaat
gaaattgggttagcctgggccgtcaccattcataagagccaggggtcagaatatcccgtc
gtcatcttgcccatgtacatgcagcattacataatgctcagccgaaacctgctttatacg
ggacttacgagggcaaaaaagctagcgatgctcgttggtcctaagaacgcaattagcatg
gccgtcaggcagatcaaagataggcaacgatacaccttgcttgagcgacgtttgggaggt
gttcccaaggccaacgaatcactagcttccgcaattctttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (37)   

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