KEGG T00617: AM1

Acaryochloris marina: AM1_B0413

Entry

AM1_B0413 CDS T00617

Definition

RecD/TraA family helicase

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

amr Acaryochloris marina

Pathway

amr03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:amr03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 HHH_5 PIF1 Helicase_RecD PhoH HHH_2 AAA_22 DUF2075 T2SE UvrD_C AAA_16 Mg_chelatase AAA_28 UPF0079 Zeta_toxin UvrD-helicase Sigma54_activat AAA AAA_10 AAA_5 IstB_IS21 NACHT HHH

Other DBs

NCBI-GI:

158340275

NCBI-GeneID:

5686036

UniProt:

A8ZLV4

Position

pREB2:complement(349158..351419)

AA seq 753 aa
MPSSSAHPGSPPIEQLQGVVERLTFHSDESGYTVARLKAPRTRELITIVGSFANIQAGQT
LQLQGIWRDHPKYGPQFQVKQYKETKPATLTGIEKYLGSGLIKGVGPVTAKRIVAHFGLD
TLDIIETHIERLIEVPGIAKKRVKLIQTALDSQKAIKEVMVFLQGHGVSTTYAVKIFKQY
GDESIETVTHNPYRLATDVYGIGFVTADEIARSLGISPHSEYRYRSGLLHVLSESAEEGH
CYLPQPELIDRAVKRLALPDYQPKPDQVEYLIHAMISDAELIVERLTHEGSTKLLCYAPP
FFQAEFHLSRRVLQLLASSLVVDNERVRAWLDRFMAQTDVSLSKQQQQAVEMAASQRVVI
LTGGPGTGKTFTTRTIVALWKAMGKDIVLASPTGRAAQRLSEVTGHEAKTIHRLLEFDPK
TMKFQRNSDNPIPADAVVIDEASMLDLFLANSLIKAIDTNAQLLLVGDTDQLPSVGPGNV
LLDLITSGRIPIIELTEVFRQAQASHIIRNAHRINQGQFPNLESVSPSPKTDCLWLGAPE
PENGVQAIQELINDLLPELGFQPARDVQVLCPMTRGEVGTRKLNQVLQALINPPCPDKPE
LTRGGLILRVGDRVLQQVNDYNREVFNGDMGVIEDINLEEIEVTVHYAERSVSYDLADLN
EIGLAWAVTIHKSQGSEYPVVILPLYMQHYIMLSRNLLYTGLTRAKKLAILVGPKNAISM
AIRQIKDRQRYTLLERRLGGVPKANESLASAIL

NT seq 2262 nt +upstreamnt +downstreamnt
atgcccagtagttctgctcatccagggtctcctcccattgaacaactacagggggttgtg
gagcgattgaccttccattctgatgagtcaggttataccgttgctcgcctcaaagcaccc
cgaacccgtgaattaattaccatcgtgggcagcttcgccaatatccaagcaggccaaacg
cttcaactccaggggatatggcgggaccatcctaagtacggtcctcaattccaggtcaaa
cagtataaggaaacaaagccagcgactctcacgggcattgagaaatacctcggcagtggc
ttaatcaagggcgtgggtcccgtgacggcaaaacgcatcgtagctcactttgggctagat
accctcgatattattgaaacccatattgaacgattgattgaagtccctggtatcgccaaa
aagcgcgtcaaactgattcagactgccttggatagtcagaaggcaatcaaagaagtcatg
gtctttctccaagggcatggcgtatccaccacttatgccgtcaagatcttcaagcagtat
ggggatgagtccattgaaaccgtcacccataacccctatcgactggcaacagatgtctat
ggcattggatttgtgaccgcagatgagattgctcgcagtcttggcatctcacctcattct
gaataccgctatcgaagtggtctgctacatgtcttgagtgaatccgcagaagaagggcat
tgttatttgcctcaaccagaattgattgatcgagcggtgaagagattagctctccctgac
tatcagcccaaacccgatcaagtggagtacttgatccatgccatgatctctgatgctgag
ctaatcgtcgaacggttaacacatgagggctcgacgaaactgctttgctacgcacctccc
ttcttccaagcagaatttcacttgtctcgacgagtcctccagctgctggccagctctcta
gttgtcgataatgaacgggtaagggcttggttagaccgcttcatggctcaaacagatgtg
agtctctcaaaacagcagcagcaagccgtggaaatggcagcgagtcagcgtgttgtgatc
cttacgggtggacccggaacggggaagacttttaccacccgcacaatcgtagcgctctgg
aaagcaatggggaaagacatcgtattagcatccccgacaggtcgagccgcgcaacgcctc
agtgaagtgacgggtcatgaagcaaaaacgattcatcgcctcttggaatttgaccccaag
acaatgaagtttcaacggaactcagataacccgatccccgctgacgcagtggtgattgat
gaagcctccatgctggatctgttcttagccaattccctgatcaaggctattgataccaac
gctcaactcttgctcgtgggggatacagaccagttacctagtgtgggaccaggaaacgtc
ctattagatctgataacctctgggagaattcccattattgaactaacggaggtctttcgt
caggcccaagccagtcacatcatccgtaacgcccatcgcattaatcaaggccagtttccc
aacttggaatccgtaagtccttcgcccaaaacagattgtctctggttaggtgcccccgaa
cctgagaacggtgtgcaagcgatccaggaactgatcaacgatcttctccctgaacttggg
ttccagccagcacgagatgtgcaagtcctatgccccatgacgaggggcgaagtcggtact
cgtaaactcaatcaagtgttgcaagctttgattaatcctccttgccccgataagcctgag
ttgacgagaggaggtctgatactcagggtgggagatcgtgttctgcagcaggtcaatgat
tacaaccgagaagtattcaacggcgatatgggagtgatcgaggatatcaatttagaagag
attgaggtcaccgttcactatgcagaacgctccgtttcctatgatctcgctgacttgaat
gaaattggcttagcctgggccgtcacaatccataagagccaggggtcggaatatcccgtc
gtcattctgcccctgtacatgcagcattacattatgctcagccgtaacttgctctatacc
ggactgacacgggcgaagaaactggcgattctcgtaggccccaagaatgccatcagcatg
gccatcaggcagatcaaagataggcaacgatacaccttgcttgagcggcgtttgggaggt
gttcccaaggccaacgaatcactagcttccgcaattctttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (37)   

Download RDF

DBGET integrated database retrieval system