KEGG T01795: AMIS

Actinoplanes missouriensis: AMIS_10800

Entry

AMIS_10800 CDS T01795

Definition

putative DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ams Actinoplanes missouriensis

Pathway

ams03410	Base excision repair
ams03420	Nucleotide excision repair
ams03430	Mismatch repair
ams03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ams03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ams03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ams03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ams03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

383776250

NCBI-GeneID:

12051311

UniProt:

I0GZW3

Position

1150795..1152294

AA seq 499 aa
MGHVRFIDIAATSAAVSSTSGRKAKIELLADALRRLGPEEITAGAAFLAGELRQRQTGVG
YAGLRDLPPPAAEASLTVAGVDAAIAEIAVVAGAGSQARRRELIGALFGAATADEQRLLV
GLFGGELRQGAQAGLLAEAVASAAAVPVTAVRRALLLCGDLKQVAVAALTGGAPALAEIS
LRVGTPLSPMLASSAPDVGAALLATGTPAVIDTKLDGIRIQVHRSGDDVAIFSRSLDDIT
ARLPGVVEAVRALPLREAVLDGEAMALGADGRPRPFQETVTKGVTLVPYFFDLLHLDGTD
LLDEPGRVRWAALADAVPGELAVGRSTAETEEEAAAVFAAALAAGQEGVVVKSPDAAYDV
GRRGAAWVKVKPRHTLDLVVLAVEWGNGRRKGWLSNLHLGARDPSTGEFVMLGKTFKGLT
DELLRWQTERFKELAVSDDGWVVRVRPEQVVEIAFDGVQTSPRYPGGVALRFARVLRYRD
DKRAAEADTIDAVRALHVA

NT seq 1500 nt +upstreamnt +downstreamnt
atgggtcacgtgcggttcatcgacatagctgccacatcggcggccgtcagctcgacctcg
gggcgcaaagccaagatcgagctgctggccgacgccctgcgccgcctgggtccggaagag
atcacggccggtgcggcgttcctcgccggcgagctgcgtcagcggcagaccggtgtgggg
tacgccgggctgcgcgacctgccaccaccggcggccgaggcgagcctcacggtcgccggg
gtggacgccgcgatcgccgagatcgcggtggtcgccggcgccggatcgcaggcccgccgg
cgcgagctgatcggcgcgctcttcggcgctgccaccgccgacgagcagcggctgctggtc
ggcctcttcggtggcgagctgcgccagggcgcgcaggccgggctgctggccgaggcggtc
gcctcggccgccgcagtgccggtcaccgcggtccgccgcgcgttgctgctctgcggtgac
ctgaaacaggtcgccgtcgcggcgctgaccggcggcgcacccgccctcgccgagatcagt
ctgcgggtcggcaccccgctgagcccgatgctggcgagcagcgcgcccgacgtcggcgcg
gccctgctcgccaccggcacgccggcggtgatcgacaccaagctggacggcatccgcatc
caggtgcaccggtccggcgacgacgtggcgatcttcagtcgcagcctcgacgacatcacc
gcccggctgcccggggtggtagaggccgtccgtgccctgccgctgcgcgaggcggtgctg
gacggggaggcgatggcgctcggcgccgacggccggccccgcccgttccaggagaccgtg
accaagggcgtcaccctggtgccgtacttcttcgacctgctccacctcgacgggacggat
ctgctcgacgagcctggccgggtgcgctgggcggcgctggccgacgcggtgccgggggag
ctggcggtcggccggtccaccgccgagaccgaggaggaggccgccgccgtcttcgccgcc
gcgctggccgccgggcaggagggcgtcgtcgtcaagtcgcccgacgcggcgtacgacgtg
ggccggcgcggcgccgcgtgggtcaaggtgaaaccacggcacacgctcgacctggtggtc
ctcgccgtcgagtggggaaacggccgccgcaagggctggctgtccaacctgcatctcggc
gcccgtgacccgtccaccggcgagttcgtcatgctcggcaagacgttcaaggggctcacc
gacgagctgctgcgctggcagaccgagcggttcaaggagctggccgtctccgacgacggc
tgggtggtgcgggtgcggccggagcaggtggtcgagatcgccttcgacggcgtgcagacc
tcaccgcgctatccgggcggtgtggcgctgcggttcgcccgggtcctgcggtaccgcgac
gacaaacgggccgccgaggcggacaccatcgacgcggttcgcgcccttcacgtcgcctag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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