KEGG   Actinoplanes missouriensis: AMIS_62080
Entry
AMIS_62080        CDS       T01795                                 
Symbol
rpoZ
Name
(GenBank) putative RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ams  Actinoplanes missouriensis
Pathway
ams03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ams00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AMIS_62080 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ams03021]
    AMIS_62080 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ams03400]
    AMIS_62080 (rpoZ)
Enzymes [BR:ams01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AMIS_62080 (rpoZ)
Transcription machinery [BR:ams03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AMIS_62080 (rpoZ)
DNA repair and recombination proteins [BR:ams03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AMIS_62080 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: BAL91428
UniProt: I0HEJ1
Position
complement(6675472..6675735)
AA seq 87 aa
MGTIANPEGITNPPIDELLDKTSSKYSLVIFAAKRARQVNAYYSQLGEGLLEYVGPLVET
TPQEKPLSIAMREINAGLLTAEPTDNP
NT seq 264 nt   +upstreamnt  +downstreamnt
gtgggaaccatcgcgaaccccgaaggcatcaccaacccgccgatcgacgagctgctcgac
aagacctcgtcgaagtactcgctggtgatcttcgcggccaagcgcgcccgccaggtcaac
gcctactacagccagttgggcgagggtctcctggagtatgtcggtcctctcgtggagacc
actccgcaggagaagccgctctccatcgcgatgcgggagatcaacgccggcctgctgacg
gcagagcccaccgacaatccctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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