KEGG   Alkaliphilus metalliredigens: Amet_2339
Entry
Amet_2339         CDS       T00551                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
amt  Alkaliphilus metalliredigens
Pathway
amt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Amet_2339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amt03400]
    Amet_2339
Enzymes [BR:amt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Amet_2339
DNA repair and recombination proteins [BR:amt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Amet_2339
    RecFOR pathway proteins
     Amet_2339
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase Sigma54_activ_2 AAA_16 Bac_DnaA nSTAND3 AAA_22 TIP49 RNA_helicase AAA_14 Sigma54_activat AAA_3 NTPase_1 TsaE DUF815 MCM NB-ARC IstB_IS21 AAA_18 AAA_24 AAA_17 KAP_NTPase TniB AAA_28 Parvo_NS1 AAA_25 AAA_19 Resolvase ABC_tran AAA_PrkA NACHT RsgA_GTPase Rad17 AAA_7 MMR_HSR1 ATPase_2
Other DBs
NCBI-ProteinID: ABR48493
UniProt: A6TQM5
Position
2405925..2406935
AA seq 336 aa
MQDQEEERMITNQPKEEDLILENGLRPKFLVDYIGQNSVKERLKIFIEAAKQRQEPLDHV
LLYGPPGLGKTTLANIIANEMNVNIKITSGPAIERPGDLAAILTNLAANDVLFIDEIHRL
NRTVEEVLYPAMEDFALDIIIGKGPSARSIRLDLSQFTLIGATTRAGQLSSPLRDRFGVI
CKLELYNNKQLTAIVKRSARILDAYIDDEGATEIASRSRGTPRIANRLLRRVRDYAQVKS
DGRITKRVAEEALILLEVDSLGLDNTDKKMIETMIYNFNGGPVGLDTLAATTGEERNTIE
DVYEPYLLQMGFINRTPRGRIVMQKAYEHFNIPSAE
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgcaggatcaggaagaagaacggatgattacaaatcagcctaaggaagaggacctaata
ctggaaaatggtttgaggcctaaatttctagttgattatattggtcaaaatagcgttaaa
gaaaggctcaagatatttatcgaagcagcaaaacaacgtcaggagcctctagatcatgta
ttgctttatggaccgcctggcttaggaaaaacaacattggcaaatattattgccaatgag
atgaatgtcaatattaaaataacttccggaccggctattgagagaccaggtgatttagct
gctatattaacaaatcttgcagcgaatgatgtgttgtttattgatgaaattcatcgttta
aaccgtacggtagaagaggtactttacccagcaatggaggactttgccttagatatcatt
attggaaaaggaccaagtgcccgttcgattcgtttagatttatcacaattcacactaata
ggtgcaaccaccagggcaggacaattatcctctcctcttagagatcgatttggtgtcata
tgcaagttggagctgtataacaataaacaattaactgctatcgtaaaacgttcagcaaga
attcttgatgcatatattgatgatgaaggagccactgaaatcgcttcaaggtctagaggc
acccctcggattgctaatcgtcttttaagaagagtcagagattatgcacaagttaagagc
gatggtagaattactaaacgtgttgcagaagaagctttgattctactagaggttgactcc
ttaggtttagacaatacagataagaaaatgattgaaaccatgatttataactttaatggg
gggccagtagggctagacaccttagccgcaacaactggagaggaaagaaatacaatagag
gatgtatatgaaccttatttattgcaaatgggctttattaacagaacacctaggggacgt
attgtcatgcaaaaagcatatgaacactttaatattccaagtgcagagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (40)   
   Pfam (40)   
All databases (77)   

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