KEGG   Akkermansia muciniphila: Amuc_0683
Entry
Amuc_0683         CDS       T00736                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
amu  Akkermansia muciniphila
Pathway
amu03420  Nucleotide excision repair
amu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:amu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Amuc_0683
   03430 Mismatch repair
    Amuc_0683
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amu03400]
    Amuc_0683
Enzymes [BR:amu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Amuc_0683
DNA repair and recombination proteins [BR:amu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Amuc_0683
   MMR (mismatch excision repair)
    Other MMR factors
     Amuc_0683
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 AAA_12 Viral_helicase1 Terminase_6N ResIII
Other DBs
NCBI-ProteinID: ACD04520
UniProt: B2UPY5
Position
802523..804532
AA seq 669 aa
MARRYVIRQDAAPVAPISGIDYRTALNEEQYAAVSSEPGPALVIAGAGSGKTRTLTYRVA
WLLDHGTDPWNILLLTFTNKAAREMTERVRSLIPLDLSRLWSGTFHSIANRILRQHAEYL
GYTPAFTIMDSDDRKSMIKSVVKSLKLDEKSTRFPKPEVLSSLFSLADNEGANIRETQEN
AYPYLSNHLDAILEVHDQYVARKQETNSMDFDDLLLNVVRLFQEQEHLRALYGSRFQHIL
VDEYQDTNYLQSRLIDMLAREHGQLMVVGDDAQSIYSWRGADMENILSFTTRYPAAKTFK
IETNYRSVPEILELSNAAIAANEVQIEKQLRSVRPTGEMPPALVPLNDDRMQAKFVVQRI
RDLIEEGTDPSEIAVLYRAHFHSMELQMELTRGEIPFRITSGIRFFEQAHIKDVVAFMRF
VVNPRDELSFRRMVMLLPGIGPGMAQKLWIRWTACPESRQETPPESFSALMLDFPVPAKS
RTAWTQLCYTLDELAPAGKLAGPASMLLSINEAVYDEYMQAAFENYDQRRQDLLHLAGFS
ERFESTEDFLSQLSLLGNTDDESAAADFSGGSVTLSTIHQAKGLEWSVVFLIGLCDGMFP
HQRVIDDGDLAGLEEERRLFYVGITRAKDQLYLTYPRWNCRAQGGTFMQMPSRFLDEFPA
GLVEEWEVE
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggctcgccgatatgtcatcaggcaggatgccgctccggtcgcccccatctccgggatc
gactaccgtacggccctcaatgaagaacagtacgccgccgtttcttcagaaccggggccg
gctcttgtcatcgcaggagccggatcgggaaaaacgcgcacgctgacttatcgcgtggcc
tggcttctggatcacggtacggacccatggaacattctgctgcttaccttcaccaataag
gcggcgcgggaaatgacggaacgggtgcgttccctgattcccctggacttgtcccgcctg
tggagcggcacgttccattccattgccaaccgcatcctgcgccagcatgcggaatacctg
ggatatacaccggcttttacaatcatggactccgacgaccgcaaatccatgattaaaagc
gtggtcaaatccctcaaactggatgagaaatccacccgcttccccaagccggaagttctt
tcatccctgttcagtctggcagacaacgagggagccaatatccgggaaacgcaggaaaac
gcctatccctacctttccaaccacctggacgccatcctggaggtgcatgatcaatacgta
gcccgcaagcaggaaaccaacagtatggactttgacgacctgcttctcaacgtcgtgagg
ctttttcaggaacaggagcacctgcgtgccctgtacggttcccgcttccagcatattctg
gtggatgagtaccaggacaccaattacctccagagccgcctcatcgacatgctggcccgg
gaacacggccagctgatggtggtgggggacgatgcccagagcatctactcctggcgcgga
gcggacatggaaaacatcctcagcttcactacccgctatccggcggcaaagactttcaag
atagaaaccaattaccgcagtgtgccggaaattctggaactttccaacgcggctatcgcc
gccaacgaagttcaaattgaaaaacagctccgctccgtgcggcccaccggggaaatgcct
cccgccctcgtcccgctcaacgacgaccggatgcaggccaaatttgtcgtccagcgtatc
agggatctcattgaagaaggcacggaccccagtgaaatagccgtgctttaccgcgcccac
ttccacagcatggaattgcaaatggaactgacccgcggagaaatacctttccgcatcacc
agcggcatcaggtttttcgagcaggcccatattaaggacgtggtggcatttatgcgtttt
gtggtcaatcccagggatgaactttccttccgccgcatggtgatgctgctgcccggcatc
ggccccggcatggcccaaaaactctggatacgctggaccgcctgcccggaaagccggcaa
gaaacccctccggaatccttttccgccctgatgctggatttcccggttcctgccaaatcc
agaacggcctggacgcagctttgctacacactggatgaactggcccctgccggaaagctg
gccggaccggcctccatgctcctttccatcaatgaggccgtgtacgacgagtacatgcag
gccgcattcgaaaattacgaccagcgcaggcaggaccttctgcatctggccggattttcc
gaacgctttgaatccacggaggattttctttcccagctttcccttttgggcaacacggat
gatgaaagcgccgcggcggacttttccggtggctccgtcaccctgtccactatccaccag
gccaagggactggaatggtctgtcgtcttcctgatcggcctgtgcgacggcatgtttccg
caccagcgggtcattgatgacggagacctggccgggctggaagaagaacgccgcctcttt
tatgtaggcattacccgcgccaaggaccagctttacctgacctacccccgctggaactgc
cgcgcccagggaggaaccttcatgcaaatgccctcccgctttctggatgaattcccagcc
ggcctggtggaagagtgggaggtggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (131)   
   KEGG ORTHOLOGY (1)   
   RefGene (128)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (148)   

Download RDF
DBGET integrated database retrieval system