KEGG   Amycolatopsis sp. BJA-103: BKN51_09855
Entry
BKN51_09855       CDS       T05296                                 
Name
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
amyb  Amycolatopsis sp. BJA-103
Pathway
amyb03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:amyb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BKN51_09855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amyb03400]
    BKN51_09855
Enzymes [BR:amyb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BKN51_09855
DNA repair and recombination proteins [BR:amyb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BKN51_09855
SSDB
Motif
Pfam: LigD_N DNA_ligase_A_C DNA_ligase_A_M
Other DBs
NCBI-ProteinID: AUI58483
UniProt: A0A2N8MM20
Position
complement(2419381..2420832)
AA seq 483 aa
MAEKLGEYRRKRKPGRTPEPIPERDGDGGTPAGANDLFVIQEHHASSLHWDVRLERDGVL
VSWAVPKGLPMSPDLERLAVHTEDHPMDYLTFEGEIPAGEYGGGTMTIWDTGRYETLHFN
DHKVEIVFHGKRARGKYLFLNVKKDGNDRGWLLKRLDPADPGRTELPPFLAPMLTKPGRL
PSTGEDAEWAYEFDWSGRRTLIRVSGGRITAYDDSGDDVTGLYPEFRGLGEQLGAADAFL
DGEIVVFDGGKPSPDGLGHRARATKSSAKRLVPRFPAFYLVNDLLHLDGRSCVESPYVER
RELLDGLGLAGPHWQVPRYYRGDGGAVARAAREHGLAGVIAKRADSAYHPGRRTGEWLSI
TGARVQQVVLGGWRPGGGSRAGTFSSLLLGVPHEDGLRYIGNVGVGFAGDELEKLSQRLF
RLERKTSPFRSVPEKQARDAHWSRPTIVGEVVFGGWTDGGCLRNPRWRGLLPDVAADEVE
LDG
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggcggagaaactcggcgaataccgccgtaagcgcaaaccgggacggactcccgaaccc
attccggaacgcgacggggacggcggaaccccggcgggggcgaacgatctcttcgtcatc
caggaacaccacgcgagcagcctgcactgggacgtccggctggaacgggacggggtgctg
gtctcctgggcggtgccgaaaggcctgccgatgtcaccggatctcgaacgcctcgccgtg
cacaccgaagaccacccgatggactatctcaccttcgaaggcgagattccggccggtgaa
tacggcggcggcaccatgacgatctgggacaccggccggtacgaaacgctgcacttcaac
gaccacaaggtcgagatcgtcttccacgggaaacgggcgcgcgggaaatacctgttcctg
aacgtgaagaaggacgggaacgaccgcggctggctgctcaaacgactcgatccggccgat
cccggccgcacggaactgcctccgttcctcgctccgatgctgaccaaaccggggcgcctt
ccctcgaccggcgaagacgcggaatgggcctacgaattcgactggtcggggcgccgcacc
ctgatccgggtgtccggcggccggatcaccgcctacgacgattcgggcgacgacgtcacc
gggctgtaccccgagttccgcgggctgggcgagcaactcggtgccgccgatgcttttctc
gacggggaaatcgtcgtcttcgacggcgggaagccgagcccggacgggctcgggcaccgc
gcgcgggccacgaagagctccgcgaaacggctcgtcccccggtttccggcgttctacctg
gtgaacgacctcctgcatctggacggccgttcctgtgtcgagtcgccctatgtcgaacgt
cgagaactcctcgatggactcggtctcgccggaccgcattggcaggtcccccggtactac
cgcggcgacggtggcgcggtcgcacgggccgcccgcgaacacgggctcgccggcgtcatc
gcgaaacgcgccgactccgcgtaccacccgggaaggcggaccggggaatggctttccatc
accggcgccagggtccagcaggtggtactgggcggctggcggccgggtggcggcagccgg
gcgggcacgttcagttcgctgctgctcggcgtcccgcacgaggatggcttgcggtacatc
gggaacgtcggtgtcggcttcgcgggcgacgagctggagaagctgtcacagcggctgttc
cgcttggagcgcaagacatccccgtttcgctccgtaccggagaaacaggcacgggacgcg
cattggtcgcggccgaccatcgtcggcgaggtcgtcttcggcggctggaccgacgggggc
tgcctgcgcaatccgcgctggcgtggcctgctgccggacgtcgccgccgacgaggtcgaa
ctcgacggctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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