KEGG   Amycolatopsis mediterranei RB: B737_4514
Entry
B737_4514         CDS       T02804                                 
Symbol
sucD
Name
(GenBank) succinyl-CoA synthetase alpha subunit
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
amz  Amycolatopsis mediterranei RB
Pathway
amz00020  Citrate cycle (TCA cycle)
amz00640  Propanoate metabolism
amz00660  C5-Branched dibasic acid metabolism
amz01100  Metabolic pathways
amz01110  Biosynthesis of secondary metabolites
amz01120  Microbial metabolism in diverse environments
amz01200  Carbon metabolism
Module
amz_M00009  Citrate cycle (TCA cycle, Krebs cycle)
amz_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:amz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    B737_4514 (sucD)
   00640 Propanoate metabolism
    B737_4514 (sucD)
   00660 C5-Branched dibasic acid metabolism
    B737_4514 (sucD)
Enzymes [BR:amz01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     B737_4514 (sucD)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2 F420_oxidored Reovirus_L2_4th
Other DBs
NCBI-ProteinID: AGT85178
Position
complement(5030920..5031804)
AA seq 294 aa
MAIFLDENSRIVVSGITGSEGAKHTRRMLAAGTNVVGGVNPRKAGQQVELSGRSLPVFGS
VADSTAATGADVCVLFVPPPFVADAVIEAVDAGIGLAVVIAEGVPVHDSARLWAHAVAAG
GRTRIIGPNCPGIISPGRSNAGIIPADITGPGRIGLVSKSGTLTYQLMHELRDIGFSTCV
GIGGDPIIGTTHIDAVEAFEKDPETDLIVLIGEIGGDAEERAAEFVRANVSKPVVGYVAG
FTAPEGKTMGHAGAIVSGSAGTAAAKKEALEAAGIRVGRTPSETAALAREVLAR
NT seq 885 nt   +upstreamnt  +downstreamnt
gtggccatcttcctggacgagaacagccggatcgtcgtttcgggcatcaccggctccgaa
ggggcgaagcacacccggcggatgctggccgccgggacgaacgtcgtcggcggcgtcaac
ccccgcaaggccgggcagcaggtggagctttccggtcgttcgctgccggtgttcggcagc
gtcgcggactcgacggcggccaccggcgcggacgtctgcgtgctgttcgtgccgccgccg
ttcgtggccgacgccgtgatcgaagcggtggacgccgggatcgggctcgcggtggtgatc
gccgaaggcgtcccggtgcacgacagcgcgcggctgtgggcgcacgccgtcgcggccggc
gggcggacccggatcatcggcccgaactgcccgggcatcatctcccccggccgctcgaac
gccgggatcatcccggccgacatcaccgggccgggccggatcggcctggtgtcgaagtcc
ggcacgctgacctaccagctcatgcacgagctgcgcgacatcgggttctcgacctgcgtg
ggcatcggcggcgacccgatcatcggcaccacgcacatcgacgcggtcgaggcgttcgaa
aaggacccggagaccgacctgatcgtgctgatcggcgagatcggcggcgacgccgaggag
cgggccgcggaattcgtgcgcgccaacgtgtcgaagccggtcgtcgggtacgtggcgggc
ttcacggccccggaaggcaagacgatgggccacgcgggcgcgatcgtgtcgggatcggcg
ggaacggccgcggcgaagaaggaagcgttggaggcagcgggaatccgggtcgggcgcacg
ccgagcgagacggcggcgctggcgcgcgaggtcctcgcccggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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