KEGG T00748: AnaeK

Anaeromyxobacter sp. K: AnaeK_0832

Entry

AnaeK_0832 CDS T00748

Definition

DNA ligase D

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ank Anaeromyxobacter sp. K

Pathway

ank03410	Base excision repair
ank03420	Nucleotide excision repair
ank03430	Mismatch repair
ank03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ank03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ank03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ank03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ank03450]

SSDB

Motif

Pfam:

DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S DNA_ligase_OB_2 mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(943122..945176)

AA seq 684 aa
MPARPAGARRGRRLPRHAGGGELSRVARAPVPTYRAQLATLVAAPPAGGGWVHETKYDGY
RIGCALEGGRATLWSRRGNDWTAQFPEVARAAEALPARSALLDGEVAAVLPGGRTSFQAL
QQAFSGGRRSLAYFVFDLLWLDGEDLSGRPLRERKDALRRLLGARGAVLRYAPHVEAPGA
EVLREACRLGLEGIVSKRADAPYRPGRNTTWTKAKCLARQELVIGGFTDPEGSRQGIGAL
LVGFHEGGALRFAGKVGTGFTQASARALRARLDRLERADPPFTPRPPGALGRIAHWVRPE
LVAEVAFTEWTDDGKVRHPSFQGLREDKRAADVVREVPGAGAPPAPPAPPAPAPAPTAAG
RARRRAAAGAAGEVVIGGVRLSHPERTMFPGEGRAALTKADVARYYDAVAGAMVPHLRGR
PLTLFHCPEGITGACRFMKHSKTWAPPAVRRIRIQEKTKVGEYLIADDRAALLALVQMDV
LELHTWNSTVEALEQPDRIVLDLDPGPEVPWREVVRAARLLRSALEALGLAAFVKTTGGA
GLHVVTPLVPRRRWEDCLAFARGLAATVARHEPRAFTVAFARAGRERRILLDYLRNNRTN
TSVAAFSLRARPGAPASVPVAWDELGPRLRPERLDARTVPRRLARLGADPWAGWARAARP
LGDAHLAAVGAAPVDEPARGGGRR

NT seq 2055 nt +upstreamnt +downstreamnt
atgccggcccgccccgccggcgcccgccgggggcgccgcttgccccgccacgccgggggt
ggtgagctttcccgcgtggcccgcgcgcccgtcccgacctaccgcgcccagctcgcgacg
ctcgtcgcggcgccgccggcgggcggcggctgggtccacgagacgaagtacgacggctac
cggatcggctgcgcgctggagggcgggcgcgccacgctctggagccggcgcggcaacgac
tggaccgcgcagttccccgaggtggcgcgggcggccgaggcgctgccggcgcggagcgcg
ctcctcgacggcgaggtggcggcggtgctgcccggcggccggaccagcttccaggcgctc
cagcaggcgttctccggcggccgccgctcgctcgcctacttcgtgttcgatctgctctgg
ctggacggcgaggacctgtccgggcggccgctgcgcgagcgcaaggacgccctgcgccgg
ctcctcggcgcgcgcggcgccgtgctccggtacgcgccgcacgtggaggcgcccggcgcc
gaggtgctccgcgaggcgtgccgcctcggcctggaggggatcgtctcgaagcgcgccgac
gcgccctaccggcccgggcggaacaccacctggacgaaggcgaagtgcctcgcgcgccag
gagctggtgatcggcgggttcaccgatcccgagggcagccgccagggcatcggggcgctg
ctggtgggcttccacgagggcggcgcgctgcgcttcgccgggaaggtcggcaccggcttc
acccaggcgtcggcgcgggcgctgcgcgcgcgcctcgaccgcctggagcgcgccgacccg
ccgttcacgccgcggccgcccggcgcgctcgggcggatcgcgcactgggtgcggccggag
ctggtggccgaggtggcgttcaccgagtggaccgacgacgggaaggtgcgccacccgtcg
ttccaggggctgcgcgaggacaagcgcgccgcggacgtggtgcgcgaggtccccggcgcc
ggcgcgccaccggcgccgccggccccaccggcgcctgcgcccgcgccgaccgccgcgggt
cgcgcccggcgccgcgcggcggcgggcgccgccggcgaggtggtgataggcggcgtccgg
ctctcgcacccggagcgcaccatgttcccgggcgaggggcgggccgcgctcacgaaggcc
gacgtggcccggtactacgacgcggtggccggcgcgatggtgccgcacctgcgcggccgc
ccgctcaccctgttccactgcccggagggcatcaccggcgcgtgccgcttcatgaagcac
tcgaagacctgggcgccgcccgccgtgcgtcggatccgcatccaggagaagaccaaggtg
ggcgagtacctgatcgccgacgatcgcgccgcgctgctcgcgctcgtgcagatggacgtc
ctcgagctgcacacctggaactcgacggtggaggcgctggagcagccggaccggatcgtg
ctcgacctcgacccgggaccggaggtcccgtggcgcgaggtggtgcgcgcggcgcggctg
ctgcgctcggcgctggaggcgctgggcctcgccgcgttcgtgaagaccaccggcggcgcg
gggctgcacgtggtgacgccgctggtgccgcggcggcgctgggaggactgcctcgcgttc
gcgcgcgggctcgccgccacggtggcgcgccacgagccgcgcgcgttcacggtggcgttc
gcgcgcgccgggcgcgagcggaggatcctcctcgactacctgcggaacaaccggaccaac
acctcggtggccgcgttctcgctgcgcgcgcggccgggcgcgcccgcctcggtgccggtg
gcctgggacgagctggggccgcggctgcgaccggagcgcctggacgcgcggaccgtcccg
cgacggctggcgcggctcggcgcggatccgtgggccggctgggcgcgcgccgcccggccg
ctcggcgacgcgcacctcgccgcggtgggcgccgcgccggtggacgagccggcgcggggc
ggggggcggcggtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ANK (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

Download RDF

DBGET integrated database retrieval system