KEGG A.oremlandii: Clos

Alkaliphilus oremlandii: Clos_0014

Entry

Clos_0014 CDS A.oremlandii

Definition seryl-tRNA synthetase (EC:6.1.1.11)

Orthology K01875 seryl-tRNA synthetase [EC:6.1.1.11]

Pathway aoe00970 Aminoacyl-tRNA biosynthesis

Class Genetic Information Processing; Translation; Aminoacyl-tRNA
biosynthesis [PATH:aoe00970]

SSDB

Motif Pfam: tRNA-synt_2b Seryl_tRNA_N DUF342 NPV_P10 Pup_ligase IncA
DUF2730 Spectrin FtsQ IFT57 DUF3166
PROSITE: AA_TRNA_LIGASE_II

Other DBs NCBI-GI: 158319073
NCBI-GeneID: 5678214
JGI: Clos0014
UniProt: A8MEB3

Position 18900..20177

AA seq 425 aa
MLDIKRIRNNLDEIKAAMARRGEKDFDLDAVVALDEKRRELLQQVELMKNEQNTVSKEVP
KLKKEGKDATEVMARMKELSGKIKELDGQVKEVEDQLEYTLLRIPNVPHPDVPQGETDDD
NIEVRKWSEPTHFDFEPKAHWDIATDLGIIDFEAASKITGARFALYKGVGARLERALINF
MLDLHIEEHGYTEVLPPFMVNRSSMTGTGQLPKFEEDAFKLPQKDYFLVPTAEVPVTNMH
RDEIIEGANLPLSYVAYTPCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYAELE
KLTNNAEKVLQLLEIPYRIVRICTGDLGFTAAFKYDIEVWMPSYNRYVEISSCSNFEDFQ
ARRANIRYRPEEKGKVEFLHTLNGSGLAVGRTVAAILENCQDDEGNVKIPEALIPYMRGI
KVITK

NT seq 1278 nt +upstreamnt +downstreamnt
atgttagatattaagagaattagaaataacctagatgaaataaaagcagcaatggcaaga
agaggggaaaaagattttgatttagatgcagtagtcgcactagatgaaaagagaagagaa
ttgcttcaacaggtagaactgatgaaaaatgagcaaaatacagtttctaaagaagttcca
aagctaaaaaaggaaggaaaagatgctacagaagtaatggcaagaatgaaagagctttct
ggaaaaattaaagaattagatggccaagttaaggaagtggaggatcagttagagtataca
ctacttcgaatacccaatgttccacatcctgatgtaccgcagggagaaacagacgatgat
aacattgaagtaagaaaatggtcagagcctactcattttgattttgaacccaaggcccat
tgggatatcgctacggatttaggaattatcgattttgaagcagcatcaaaaataacagga
gcacgatttgcgctatataaaggcgtaggcgcaagattagagagagctttaatcaacttc
atgctagatcttcatatagaggagcatggttatacagaggttctaccgccattcatggtg
aatagaagcagtatgacgggtactggacaattgcctaaatttgaggaagatgcttttaaa
ctaccacagaaggattacttcttagtaccgactgcagaggttccagtgacaaatatgcat
agggatgagattatagaaggagcaaatctacctttaagctacgtagcatatacgccttgt
ttccgatcagaagcaggatctgctggtcgagatacgagaggtttaataagacaacatcag
ttcaataaagtagagcttgtgaaatttgttaagccagaggattcctatgcagagcttgaa
aaacttacaaacaacgcagaaaaagtacttcaattactagaaataccttatcgaatcgtg
agaatctgcacgggagatttaggattcactgctgcatttaaatatgatatcgaggtatgg
atgccgagttataatcgatatgttgaaatatcttcttgcagtaactttgaagacttccaa
gccagaagagcaaatatcagatatcgtcctgaggaaaaaggtaaagtagaattccttcat
acattaaatggttcaggtcttgctgtaggtagaactgtagcagctattttagaaaactgc
caggatgatgaagggaatgtaaaaataccggaagctttaatcccttatatgagaggaatc
aaggtgattacaaaataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-AOE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (11)   
   PROSITE (1)   
All databases (24)

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