KEGG A.oremlandii: Clos

Alkaliphilus oremlandii: Clos_0042

Entry

Clos_0042 CDS A.oremlandii

Definition shikimate 5-dehydrogenase

Orthology K00014 shikimate 5-dehydrogenase [EC:1.1.1.25]

Pathway aoe00400 Phenylalanine, tyrosine and tryptophan biosynthesis
aoe01100 Metabolic pathways

Class Metabolism; Amino Acid Metabolism; Phenylalanine, tyrosine and
tryptophan biosynthesis [PATH:aoe00400]

SSDB

Motif Pfam: Shikimate_dh_N Shikimate_DH F420_oxidored OCD_Mu_crystall NmrA
KR ApbA ThiF adh_short

Other DBs NCBI-GI: 158319101
NCBI-GeneID: 5677725
JGI: Clos0042
UniProt: A8MEE1

Position 46667..47527

AA seq 286 aa
MSYVITDETKLTGIIGRPIKQSFSPKIHNGAFQYLNLNYIYIPFEVVQQDLSKTVEAMKV
LKFRGFNVTMPHKREVMNYLDEVSENAKIIGAVNTVVNQNGKLVGHNTDGKGYVQSLEDE
GIYVKEKTFVIAGAGGAARSVAVQLALDGAKKITILNRTIDKAHDIAQLIGMSIPNVHIE
INCLENKTLAKAVEEADVLINTTSLGMYSMEEESIIGEEKVLPSNLVVSDLIYNPAKTKL
LQQAESRGCKTINGLGMLIGQAAIAFELWTEVAMPIDYIKKTLFTR

NT seq 861 nt +upstreamnt +downstreamnt
atgagttacgtgattacagatgaaacgaaactaacaggaattataggtagaccaatcaaa
cagagcttttctcctaaaatacataatggtgcatttcaatatctcaatttaaattacatc
tatattcccttcgaagtggtgcagcaggacctatcaaagacagtagaggccatgaaggtt
ttaaaatttcgaggttttaatgtgaccatgcctcataagcgagaagttatgaattattta
gatgaggtttctgagaatgcaaagattattggtgctgtgaatacagtggttaaccagaat
ggaaaactggtaggtcataataccgatggaaagggatatgttcagtcattggaggatgag
gggatttatgtaaaggaaaaaacttttgtaatagcgggtgcaggtggggcagctagaagt
gtagcagtccagctagccttggatggagcgaagaagatcacaattttaaatcgaactata
gacaaggctcatgatattgcccaactcataggcatgagtattcctaatgttcatattgaa
ataaactgcttagaaaacaaaaccttagcaaaggctgtagaagaggcagatgtgttaatt
aatactacttcattaggtatgtattcaatggaggaggaaagcattataggagaggaaaag
gtcctcccatcgaatttggtagtatccgatttgatttataatccagcaaaaacgaagcta
ttgcagcaagcagaaagcagagggtgtaaaaccattaatggtctagggatgctgattgga
caagcggctatcgcatttgaactatggacagaggttgcgatgcctatagattatattaag
aagacactctttacgcgttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-AOE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)

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