KEGG   Asparagus officinalis (garden asparagus): 109821831
Entry
109821831         CDS       T05243                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cellulose synthase-like protein D5
  KO
K00770  1,4-beta-D-xylan synthase [EC:2.4.2.24]
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof00520  Amino sugar and nucleotide sugar metabolism
aof01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:aof00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00520 Amino sugar and nucleotide sugar metabolism
    109821831
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:aof01003]
    109821831
Enzymes [BR:aof01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.24  1,4-beta-D-xylan synthase
     109821831
Glycosyltransferases [BR:aof01003]
 Polysaccharide
  Structural polysaccharide
   109821831
SSDB
Motif
Pfam: Cellulose_synt zf-RING_4 Seryl_tRNA_N
Other DBs
NCBI-GeneID: 109821831
NCBI-ProteinID: XP_020243574
Position
8:122122889..122127902
AA seq 989 aa
MARRASSPASPVTITISPQSNRVTHGSHLSGNVTGVAPFRSIGITSGNPNSPIAARPISA
RYSASPKDETREVTSESVHYTVHIPPTPDHQPFSVSSSVPEQKRSFISGTIFTGGFNSVT
RGHVVESMEVEKSAGMFCRMNGCDEEALVSKMPCECGFLICKDCFKECVQGSGQCPGCKE
PYKGEEEEEEEEEMEGGESGAVSAEKIAVVDFRAGRRRSVVKSMVKNEFDHNRWLFETKG
TYGYGNALWPKDGSNGGGGGGVGFKGFEELPDFGGTSKRPLTRKVGVSQAVLSPYRLLIA
IRLVALGFFLAWRIRHPNHEAIWLWALSVTCELWFAFSWLLDQLPKLNPINRSTDLSVLS
LRFESPSPRNPKGRSDLPGVDIFVSTADPDKEPPLVTANTILSILAVDYPVEKLACYLSD
DGGSLLTFEALAETASFARIWVPFCRKHKIEPRNPEAYFGVKRDFLKNKVRVDFVRERRK
VKREYDEFKVRVNSLSESIRRRSDAYNAHEELRAKKMQIEGEIVAEETVKVPKAVWMSDG
SHWPGTWFSGEPDHSRGDHAGIIQAMLAPPNSEPVIGTESSNSNVIDTTXXXXXXPMLVY
VSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRG
GDRICYVQFPQRFEGIDPNDRYANHNLVFFDVTMRAMDGLQGPMYVGTGCIFRRTALYGF
SPPRATEHHGWFGRKKIKLLLRKPTMGKKSDKAQMNDDEEDIESLLMPKKYGNSASLVAS
IPIAEYQGRLLQDMPGVSQVPPSLAALAGARRTPSMPPLSPQAIPLQGCRWRERAVLGSC
AWATSAHRPAVLKESSKLVXRVDISFTLTSKPATXDNRTDLFADLYVLRFELLMRLPPIT
IMMVNTIAIAVGCSRALYSPFPQWSKLLGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIVF
VWSGLISIVVSLLWVYISPPVGAKDYMNL
NT seq 2970 nt   +upstreamnt  +downstreamnt
atggctcggagagcctcatctcctgcatccccagttacaataacaatctcccctcaatcg
aaccgagtaactcacggaagccacctcagcggaaatgtgaccggagttgcgccatttcgg
agcatcggcatcacgagcggcaaccccaactcaccgatcgcggctcgtccgatcagcgct
cggtactccgcttccccaaaagacgaaacccgagaagtcacttccgaatcggttcactac
acagttcacatcccgccaaccccagatcaccagccgttttcagtatcaagctcagttcca
gagcaaaagaggagcttcatctccggcacaattttcaccggggggttcaattctgtgacc
cgaggccatgtcgtcgagtccatggaagttgagaagtcagccggaatgttctgccgaatg
aacgggtgtgatgaggaggcgttggtgtcgaaaatgccctgtgagtgcgggtttttgata
tgcaaggattgctttaaggagtgcgtccagggatccgggcagtgcccgggttgtaaagag
ccttataaaggcgaagaggaggaggaggaggaggaggagatggagggaggcgaaagcggg
gccgtttctgcagagaaaatcgcggtggtggattttagggcggggaggaggagatcggtg
gtgaaatcgatggtgaagaatgagtttgatcataatcgatggctgtttgagacgaagggg
acttatggatatgggaatgctttgtggccgaaggatgggagtaacggtggaggaggagga
ggagtagggtttaaggggttcgaagagctgccggattttggagggacgagtaagcggccg
ttgacgaggaaagttggggtttctcaggctgttctcagtccttacaggctgctgatcgcg
atcagactcgtagctctcggcttcttcttggcctggcgaattcgccatccaaaccatgag
gcaatttggctctgggcactctccgtcacctgtgagctctggttcgctttctcatggctc
ctcgaccaactcccaaaactcaaccccattaaccgctccactgacctctccgtcctctcc
ctccgcttcgaatccccctcccctcgaaaccccaaaggccgctccgacctacctggtgtt
gacatcttcgtctctaccgcagaccctgataaagaacccccactcgtcacggccaacacc
atcctctccattcttgctgtcgattaccctgttgaaaaactcgcttgctatctctctgat
gatggtgggtccctcctcacttttgaagccctggctgagactgccagcttcgcaaggatt
tgggttcccttctgtaggaaacataagattgagccgaggaatcctgaggcatattttggg
gtgaagagggatttcttgaagaataaggtgagggtggattttgtgagagagaggaggaag
gtgaaaagggagtatgatgagtttaaggtgagggtgaactcgctttcggagtctattagg
aggaggtctgatgcttataatgctcatgaggagcttagagctaagaagatgcagattgag
ggagaaattgttgctgaagagactgtgaaggttccgaaggctgtttggatgtcggatggc
tcgcactggcctggaacttggttttccggtgagcctgatcattccagaggcgatcatgcg
ggcataattcaggctatgctggctcctccaaattcggaacctgtaattggcactgaatcc
tcaaacagcaacgtgatcgatactaccnnggnnnnnnnnnnnnnnccaatgctcgtctat
gtctcgagagagaagaggccgggttatgaccacaacaagaaggcaggagccatgaatgcg
cttgttcgaaccagtgctataatgtcgaatggcccattcattctgaatctggactgtgat
cactatatctacaattcattggcgttgagagagggaatgtgttttatgcttgatcgaggt
ggtgaccgaatctgctatgttcagttccctcagaggttcgagggtattgatcccaacgac
cgttatgcaaatcataacctggtatttttcgatgtcacgatgagagcaatggacgggctg
caaggcccaatgtatgttggaaccggctgcatctttcgacgtactgcattgtatggcttc
agccctcctcgagcgacggagcaccatggctggttcggtcgaaaaaagatcaaacttttg
ttaaggaagccgacgatggggaagaagagcgataaagctcagatgaacgacgatgaggag
gacattgaatcattgctgatgccgaagaaatatggcaactctgccagcctcgtcgcatca
ataccaatcgcagagtaccagggccgacttctccaagacatgccgggagtttcccaggtt
ccgcccagcttggccgcgttagctggcgctaggagaaccccctcgatgccgccactgtcg
ccgcaggctattccgctccaaggatgtcggtggcgcgaacgagcagttctcggctcatgc
gcctgggcgaccagcgcgcaccgcccagcagtcctcaaggaatcctcaaagctcgtcngc
cgcgtcgacatctccttcactctgacgtcaaaaccggccacgnacgacaatcggacggac
ctcttcgccgacctgtacgtactgaggtttgagctcctgatgcgcctgccgccgatcacg
atcatgatggtgaacacgatcgcgatcgccgtcgggtgctcgagggccctgtacagcccg
ttcccgcagtggagcaagcttttgggtggggttttcttcagtttctgggtgctgtgtcat
ctgtatccgtttgcaaaggggttgatggggaggagagggaaagtgccgaccattgtgttt
gtttggtctgggttgatttctattgtggtgagtttgctttgggtgtacattagtcctcct
gttggagctaaggactacatgaacctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system