KEGG   Asparagus officinalis (garden asparagus): 109829883
Entry
109829883         CDS       T05243                                 
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e
  KO
K03283  heat shock 70kDa protein 1/6/8
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
aof04141  Protein processing in endoplasmic reticulum
aof04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109829883
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109829883
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109829883
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aof01009]
    109829883
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aof03041]
    109829883
   03009 Ribosome biogenesis [BR:aof03009]
    109829883
   03110 Chaperones and folding catalysts [BR:aof03110]
    109829883
   04131 Membrane trafficking [BR:aof04131]
    109829883
   03051 Proteasome [BR:aof03051]
    109829883
   03029 Mitochondrial biogenesis [BR:aof03029]
    109829883
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aof04147]
    109829883
Protein phosphatases and associated proteins [BR:aof01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     109829883
Spliceosome [BR:aof03041]
 Complex B
  Other components
   Prp19 complex
    109829883
 Complex C
   Prp19-CDC5 complex
    109829883
Ribosome biogenesis [BR:aof03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    109829883
Chaperones and folding catalysts [BR:aof03110]
 Heat shock proteins
  HSP70 / DNAK
   109829883
Membrane trafficking [BR:aof04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    109829883
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    109829883
Proteasome [BR:aof03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    109829883
Mitochondrial biogenesis [BR:aof03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    109829883
Exosome [BR:aof04147]
 Exosomal proteins
  Proteins found in most exosomes
   109829883
SSDB
Motif
Pfam: HSP70 MreB_Mbl FGGY_C ParM_N DDR DUF3813
Other DBs
NCBI-GeneID: 109829883
NCBI-ProteinID: XP_020252551
Position
2:2278998..2282129
AA seq 339 aa
MKLWPFMVVSGSKDKPKIVVEYKGEEKRFSAEEISSMVLMKMREIAETYLGSTVEDAVIT
VPAYFSDSQRQATKDAGAIAGLNVKRIINEPTAAAIAYGLEKKDTSIDERNILIFDLGGG
TLDVSCLVIDDSIFQVKATAGDTHLGGEDFDHRMVDHFVQKFKKRYNRDISKSARALRRL
RTSCERAKRALSSAYQTMIECDALFEGIDFYANITRARFEELNMDLFQKCIEPVEKCLKD
ARMEKSSIHDVVLVGGSTRILKVQQLLQDFFNGKELCKSINPDEAVAYGAALQAAVLSGE
NDEMVEDLLLMDVTPLLFSPKVGFVVEFIISSVDYNKFK
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaagctgtggccatttatggtggtttctggctcgaaagacaagccgaagattgttgtg
gagtacaagggtgaagaaaagcgattttccgcagaagaaatctcctccatggttctgatg
aagatgcgtgaaattgcagagacctatctaggctccaccgtcgaggacgctgtcatcacg
gttcctgcatacttcagcgactctcagcgccaggcaactaaggatgctggcgccattgct
ggcctcaatgtgaagcgcattataaatgagcccaccgctgctgccattgcttacggactt
gagaagaaggatacgagcattgacgagaggaacattctgatctttgacctgggtggtggc
actttagatgtttcttgtctcgtaatcgatgatagtatcttccaggttaaggccacagcc
ggagacacccatctcggcggagaagatttcgaccataggatggtggaccactttgttcag
aagttcaagaagaggtacaatagagacatcagcaagagcgccagagctcttaggaggctg
aggacatcctgtgagagggcgaaaagggctctttcctcggcttaccaaacaatgatcgag
tgcgatgccctctttgagggcatcgacttctacgctaatattactcgagccaggttcgaa
gagcttaacatggatctgtttcagaagtgtattgagcctgtggagaagtgtttgaaggat
gcaaggatggagaagagctccattcatgatgttgttcttgttggtggatcaactagaatc
ctaaaagttcagcagttgctgcaggatttcttcaacggcaaggagctctgcaagagcatt
aaccccgacgaggctgtagcctacggagctgcccttcaagccgcggtgttgagcggggag
aacgatgaaatggtagaggacttgctgctgatggatgtcaccccattattgttttcgcca
aaagttggttttgttgtcgaattcattatatcttcggtcgattataataaattcaaa

  All links  
Ontology (9)   
   KEGG BRITE (9)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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