KEGG   Asparagus officinalis (garden asparagus): 109830331
Entry
109830331         CDS       T05243                                 
Name
(RefSeq) exosome complex component RRP45A-like
  KO
K03678  exosome complex component RRP45
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109830331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109830331
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109830331
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 109830331
NCBI-ProteinID: XP_020253161
Position
2:complement(13928996..13936906)
AA seq 445 aa
MDQRLANAWRMTVNEKKFIETALLSDLRVDGRRPFDYRRITIKFGSKDGSSEVQLGETHV
MGYVTSQLVQPYRDRPNEGTLSIFTEFSPMADPTFEAGRPGESAIELGRVIDRGLRESRA
VDMESLCVIAGKSVWAVRVDIHILDNGGNLIDAANIAALAALLTFRRPECTLGGENSQDV
IVHDPEVREPLPLTIHHLPVAVTFAFFGEGNIMVIDPTHKEEAVMGGRMTATLNSNGDIC
AVQKGGGEGVISSVVMQCLRIASIKAADITSKIKNAVDAYDTERALRKVKRHPSSVAQKV
SVPDVIMKESQLDEFIRQKAQMVTEEPGVESMGTESLSCKRDANSIGRAFTGGPSNWDPY
SKSISMTSVRAQTSTGPMAIKREHEAMDIQKPIESNPDGRTIPDASGSSIVDGSGVGQQS
NTPKSLKDAVKVKSKKKTKESSTAM
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggatcagagattagcgaacgcctggcgaatgaccgtcaacgagaagaagttcatcgag
accgcactcctctcggatctcagagtcgacggccgccgcccctttgattaccgtcgcatt
accatcaaatttgggagcaaggatggttcatcagaggtgcaacttggcgagactcatgtc
atgggctatgtgacttcacaattggtccaaccatatcgtgacagaccaaatgaagggacg
ctttcaatttttactgagttttctccaatggctgatcctacttttgaggcaggccgccca
ggagaatctgcaattgaattaggacgtgtaatagatcgtggtctgcgggagagtagggca
gtggatatggaatccttatgtgtcattgcagggaaatctgtctgggccgttcgcgtagac
atccacattcttgataatggagggaatctcattgatgctgctaacattgctgctttagct
gctctgttaacatttcgaaggcctgaatgtacattaggtggagaaaatagccaggatgtt
attgtgcatgatcctgaggtcagggaaccacttcccttgaccatccatcaccttcctgtg
gcagtaacctttgctttctttggtgaagggaacatcatggtgattgatccaacccacaag
gaagaggctgtaatggggggcagaatgactgctacattgaactcaaatggtgacatttgt
gctgtacagaaaggtgggggtgaaggcgtgatttcaagtgttgttatgcagtgcttgcgg
attgcttccataaaagctgctgatatcacaagcaaaattaagaatgcggtagatgcatac
gacactgaaagggcacttcgaaaagtgaagcgccatccatcatcagttgcgcaaaaagtt
agtgtaccagatgttatcatgaaggagagccaacttgacgaatttattagacaaaaagct
caaatggtgacagaagagccgggtgtcgaaagcatgggaactgaatctttatcttgtaaa
agagatgccaatagtataggcagagcatttactggcggtccttcaaattgggatccatat
tcaaagagcatatctatgacttctgtcagagctcaaacttcaacaggtcctatggcaata
aagagagaacatgaagccatggacattcagaagccaatagaatccaatcctgacggaaga
acaattccagatgcttctggttccagtatagttgatggatctggtgttggccagcaatct
aacaccccaaagagtctaaaagatgccgtgaaggtgaaaagcaaaaagaaaaccaaagaa
tcttctactgcaatgtga

DBGET integrated database retrieval system