KEGG   Asparagus officinalis (garden asparagus): 109833628
Entry
109833628         CDS       T05243                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03083  Polycomb repressive complex
aof04120  Ubiquitin mediated proteolysis
aof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109833628
   04120 Ubiquitin mediated proteolysis
    109833628
  09126 Chromosome
   03083 Polycomb repressive complex
    109833628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aof04131]
    109833628
   04121 Ubiquitin system [BR:aof04121]
    109833628
   03036 Chromosome and associated proteins [BR:aof03036]
    109833628
Membrane trafficking [BR:aof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    109833628
Ubiquitin system [BR:aof04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     109833628
   Cul7 complex
     109833628
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     109833628
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     109833628
SSDB
Motif
Pfam: Skp1
Other DBs
NCBI-GeneID: 109833628
NCBI-ProteinID: XP_020256959
Position
3:complement(30492044..30501341)
AA seq 178 aa
MINSGEKEAGFRVGEGVLRKAMEYCYEHGRRKRYTLVDFMYGGQYYPPHKHPAEYEENKA
VDEGLRDWDNDFIRGCDTETVLELITAADHLMIIRLSDLVCQSVVDMTIGDVMIGEGADM
IQKIFKVKFDMTQIELEEEDNENRLMLLNKSVLKESNVDSLLGLSDFIASPPTDEHSD
NT seq 537 nt   +upstreamnt  +downstreamnt
atgatcaacagcggcgagaaagaggctggattccgcgtgggagagggggtccttcgtaag
gcgatggaatactgttacgagcacggccggcgcaagaggtatactcttgtcgatttcatg
tacgggggccagtattatcctccacacaagcacccggccgagtatgaagagaataaggcc
gtggatgagggtctgagggattgggataatgattttattcgtggttgcgacacggaaacc
gtcttagagctcataactgctgcagatcatctgatgatcatcaggctatccgatctggtt
tgccaatctgtagtggacatgacgattggggacgtgatgataggggagggtgcggacatg
attcagaagatattcaaagtcaaatttgacatgacacagattgaactagaagaggaagat
aacgagaacagattaatgctgcttaataaatcagtgctgaaggagtccaatgtggacagc
ttgctcgggttgagtgattttatcgcttcaccaccaacagatgaacatagtgattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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