KEGG   Asparagus officinalis (garden asparagus): 109834355
Entry
109834355         CDS       T05243                                 
Name
(RefSeq) geranylgeranyl transferase type-2 subunit beta 1-like isoform X1
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:aof01006]
    109834355
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aof04131]
    109834355
Enzymes [BR:aof01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     109834355
Prenyltransferases [BR:aof01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   109834355
Membrane trafficking [BR:aof04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    109834355
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    109834355
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_C Fer2_3 SQHop_cyclase_N
Other DBs
NCBI-GeneID: 109834355
NCBI-ProteinID: XP_020257951
Position
3:complement(77096687..77112057)
AA seq 369 aa
MDELESDKHVKYILSIEKKKDDVEALLMEHLRINGAYWGLTTLDILHKISAVDPEEVISW
VMKCYHEDCGGFGGNIGHDPHLLYTLSAVQILALFDRIDVLDAEKAPKGTCLNVVLKFVQ
EDAIFFNVLQLAKRKSRFIISSFLLLFLIHELDVAGLQNEDGSFSGDMWGEIDTRFSYCA
ICCLSILHCLNKINVEKAVNYIVSCKNLDGGFGCTPGGESHAGQIFCCIGALAITGSLHH
VDRDLLGWWLCERQCKNGGLNGRPEKDADVCYSWWVLSSLIMIDRVHWIDKDKLTRFILN
CQDKENGGISDKPNYAVDVFHTYFGVAGLSLMEYPGLKSIDPAYALPVDVVNRIFFGKLI
GDQSSSKVL
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggacgaactagaatcagataaacacgtgaagtacatcctctcaatcgaaaagaaaaag
gatgatgtcgaagctctactaatggagcacttaaggataaacggagcttattggggttta
acgactttggacattctccacaagatctcggcagttgatcctgaggaggtgatctcatgg
gtgatgaagtgttatcatgaagattgtggtggctttggtgggaatattgggcacgatcct
caccttttgtacacgcttagtgctgttcagattttagctctttttgatcggattgatgtt
ttggatgctgaaaaggcacctaaagggacttgtctcaatgtggtcttgaaatttgttcaa
gaggatgcgatatttttcaacgtactgcaattagccaaacgaaaatcaagattcattatc
agttcctttcttttgttattcttaattcatgagctagatgttgctggtcttcaaaatgaa
gatggatctttctctggggatatgtggggtgaaattgacacgaggttctcttactgtgca
atttgttgcctttcgatattacactgtctcaataagataaatgtggaaaaggctgtgaat
tatattgtgagctgcaaaaatttagatggtggatttgggtgtacacctggaggagaatct
catgctggacaaatcttctgttgtattggtgcccttgcgataacgggatcgctgcatcat
gtagacagagaccttcttggttggtggctatgtgagcgtcaatgtaaaaatggaggacta
aatgggcgtcctgagaaagatgcagatgtctgttattcgtggtgggtactttcaagccta
attatgattgatcgagtgcattggattgataaggataagcttacaagattcatcttaaac
tgccaggataaagagaatggaggtatttcagataagcccaattatgctgttgatgttttt
catacctactttggtgtagcaggactttcacttatggaatatccgggattgaagtctatt
gatcctgcttatgcattacccgtggatgtggtgaataggattttctttgggaagctgatt
ggtgatcaaagttcttctaaagtgctgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system