KEGG   Asparagus officinalis (garden asparagus): 109842895
Entry
109842895         CDS       T05243                                 
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase PP1-like
  KO
K06269  serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109842895
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aof01009]
    109842895
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aof03021]
    109842895
   03019 Messenger RNA biogenesis [BR:aof03019]
    109842895
   03041 Spliceosome [BR:aof03041]
    109842895
Enzymes [BR:aof01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     109842895
Protein phosphatases and associated proteins [BR:aof01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    Catalytic subunits
     109842895
Transcription machinery [BR:aof03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     109842895
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     109842895
Spliceosome [BR:aof03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    109842895
SSDB
Motif
Pfam: Metallophos STPPase_N
Other DBs
NCBI-GeneID: 109842895
NCBI-ProteinID: XP_020267392
Position
5:complement(5670065..5679826)
AA seq 302 aa
MEAALLDDIIKRLLXSARPGKQVQLSEVEIRQLCVASREIFLQQPNLLELEAPIKICGDI
HGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNH
ECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLSNLDQ
IKSLSRPTDVPDTGLLCDLLWSDPGREVQGWGMNDRGVSYTFGSDKVQEFLSKHDLDLVC
RAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKPKF
MM
NT seq 909 nt   +upstreamnt  +downstreamnt
atggaggcggcgttgctcgacgatatcatcaagaggctgctgnnatcggcgaggccaggg
aagcaggtccagctatcggaggtggagatcaggcagctgtgcgtcgcttcgagagagatc
tttcttcagcagcccaatctcttggagctcgaagctcccatcaagatctgcggtgatatt
catggccaatacagtgaccttttgagactatttgagtatggaggcttcccacctgaagca
aattatttatttttaggcgattatgttgatcggggtaaacaaagcttagagacgatatgc
ctgcttcttgcatataaaatcaaataccctgaaaactttttcattctccgaggaaaccat
gaatgtgcttctataaatcggatttatgggttttatgatgaatgtaaacgccggtttaat
gtgagactatggaaggtctttacagactgcttcaactgtcttcctgtagctgctcttata
gatgataaaatcctttgcatgcatggtgggctgtccccagatctgtcaaacttggaccaa
atcaaaagtttatctcgtccaactgatgttccggacactggtttactctgtgacttactc
tggtcagatcctggtagagaggttcaaggttggggaatgaatgatagaggagtttcatac
acttttggtagtgataaagtccaagaattcttgtcaaagcatgacctcgatcttgtttgc
cgtgcacatcaggttgtggaagatggctatgaattttttgcagatagacaacttgtcact
atattctcagccccaaattactgcggtgaatttgataatgctggtgctatgatgagtgtc
gatgaaaccttaatgtgctcttttcagatcctcaagcctgcagagaagaaaccaaagttt
atgatgtga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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