KEGG   Asparagus officinalis (garden asparagus): 109845109
Entry
109845109         CDS       T05243                                 
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU70
  KO
K10884  ATP-dependent DNA helicase 2 subunit 1
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    109845109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aof03041]
    109845109
   03400 DNA repair and recombination proteins [BR:aof03400]
    109845109
Spliceosome [BR:aof03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    109845109
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     109845109
SSDB
Motif
Pfam: Ku_N Ku Ku_C SAP HeH
Other DBs
NCBI-GeneID: 109845109
NCBI-ProteinID: XP_020269900
Position
6:76148632..76163714
AA seq 626 aa
MDLDPEGIFRDDSDSDNDFFQEREASKEYVVYLVDASPKMFSPAVTDEDEKMETHFHVAI
NCISQALKTQIIGRSNDEVAICFFNTREKKNLQNLNGVYVFDVMERESLDKPTAKLIKEF
SSIGENFMNSIGSQYGIISGSRENSIYNALWVGQALLRKGSTKNVSKRMLIFTNEDDPFG
TVTGATKKDMIRTTLQRAKDAQDLGISIELLPLSRPDEKFDVSVMYSDLIGLEAEEVSRF
LPSVGERLEDMTTQLKKRMFTKRKIRSIWFSISNDICIEVNTYALIRPTLPGAILWLDSV
TNLPLKSERSFICADTGALLHEPPKRFHPYRSESVVFSTHELSQIKKVSNVQLRLLGFKP
LDCLKDYHNLRPSTFIFPSDEEIFGSTRIFIALHRSMLRLNRYAVAFYGISAHPQLVALV
AQEEIMSSSGQVEPPGMHMIYLPYSDDIRQVEELHTAVDCVAPRATDEQIEKASNLLRRM
DLKDFSVCQFSNPALQRHYGILEALALGEDEMPDIKDETWPDEEGLARPRTAHALEDFKI
AVYGENHDQEEAESMASKSSASEATKKRKATAEAAVGKYNWADLADNGKLKDLTVAELKH
YLTAHNLPVAGKKEVLISRILTHLGK
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggatttggaccccgagggcattttcagagacgactccgactccgataacgacttcttt
caggagagagaggcgagcaaggagtacgtcgtgtatttggtcgatgcctcgcctaagatg
ttcagtcccgctgtcaccgatgaagatgaaaagatggagacacatttccatgttgcgatc
aattgcatttcacaggccttgaagacgcagatcattggaagatcaaatgatgaagtcgca
atttgtttctttaacactagagaaaagaaaaatctacaaaatctaaatggtgtttatgtc
ttcgatgttatggagcgagaatctcttgataagcccactgcaaagctaattaaagaattc
tcttctattggagagaatttcatgaacagcattggtagtcagtatgggatcatatctgga
tcccgggaaaattccatatataatgctctatgggttggacaggctttgctgcgtaagggt
tccacaaaaaatgtgagcaagaggatgcttatattcaccaatgaagatgatccctttgga
actgttacaggggcaaccaaaaaggatatgatcagaacaaccctccaacgcgcaaaagat
gcacaagaccttggtatctcaattgagcttcttcccttgagcaggcctgatgagaaattc
gatgtgtctgttatgtattctgatttaattggtttggaagctgaagaggtatctcggttc
ttgccatctgtaggggaaagattggaagatatgactactcagctgaagaaaaggatgttt
acaaagcgtaaaattagaagcatctggttctcaatatcaaatgatatatgtatcgaagtg
aatacttatgctttgatccgtcctactttaccaggggcaattttgtggcttgattctgtc
actaatcttccattgaagtcggaaaggtctttcatatgtgcagatactggcgctttactt
catgaaccacctaaacgttttcatccgtacagaagtgagagtgttgtgttttctacacat
gagctgtctcaaataaagaaggtatcaaatgtccaacttcggcttctaggattcaagcca
ctggattgcttaaaggattatcacaatttgagaccatcaacttttatctttcccagtgat
gaggaaatttttggaagcactcgcattttcattgctttgcataggtcaatgttacgcctc
aaccggtatgcagtcgcattttatggaatctcggctcatcctcaactcgttgcactagtt
gcacaagaggagataatgagttcaagtggtcaagttgagcctccaggaatgcatatgatt
tatcttccatattcggatgatattagacaagttgaagagcttcacacagcagttgattgt
gtagcacctcgtgcaacagatgaacaaattgagaaagcctctaatttattacggcgtatg
gacttgaaagatttctcagtttgccaattctccaatccagcgctacagagacattatggg
attttggaggccttagctttgggtgaagatgagatgccagacatcaaagatgaaacttgg
cctgatgaagaaggcttagccaggcctagaacagcccatgcacttgaagatttcaaaatt
gcggtgtatggtgaaaaccacgaccaagaagaagctgaatccatggcttcaaaaagttct
gccagtgaggctacaaagaagaggaaagcaactgcagaagcagccgtgggaaaatacaac
tgggctgaccttgcagataatggaaagctgaaggatctaactgttgcggagttgaagcac
tatctaacagcacacaatctcccagtagctggaaagaaagaagttttaatcagcagaatt
ttgactcacttgggcaaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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