KEGG   Asparagus officinalis (garden asparagus): 109846248
Entry
109846248         CDS       T05243                                 
Name
(RefSeq) zinc phosphodiesterase ELAC protein 2-like
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aof03016]
    109846248
Enzymes [BR:aof01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     109846248
Transfer RNA biogenesis [BR:aof03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    109846248
 Prokaryotic type
    109846248
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B_4 Lactamase_B
Other DBs
NCBI-GeneID: 109846248
NCBI-ProteinID: XP_020271059
Position
6:complement(63999718..64028252)
AA seq 962 aa
MLHISSLKLLSSTPLLKLPFSSPSSLFFNPKTPSKLHHSHFTVLSYYSRRDRRKGRGGSA
PQRRGRSTITEVEMEEKKEAMGGFNKRRAEGRDAGGKRRNLQQKVQRLNPVSTICYVQIM
PQISLFLLEIAGVQDFVPPSCALSSSWICAALLKLYQLAHYYFCRLGLQRFCTEHKIKLS
KIDHIFLTRVCSETAGGLPGLLLTLAGIGEEGMSVNMWGPSDLKYLVDAMKSFIPHAAMV
CAHSFGETQDKSEVAVSFPDTGRITDPIVLIDDEVVRLSAIPLRPSQSNNGSTLKPGDIA
VVYVCELPEIKGKFDPVKASSLGLKPGPKYRELQLGKSVMSDYQDIMVQPSDVLGPSVPG
PIVLIVDCPTSDHMLELFSLQSLECYYVDSTDHKGEGIKHVNCVIHMSPASVTRDADYQK
WMRMFGITQHIMAGHEIKNMEIPILKASARISSRLNYLCPPFFPAPGFWSLNNINFFPHP
NGSCEEPSPDSGNQVSAENLLKFHLRPYAQLGLDRSAIPSLLNHKDIVDELLSEIPEIVD
ISKYLRQFWTAESKSAMCKKAENITMVEEPWINEALCSPNSKLELLGSKEHLNATEKNSD
IPPCLENITREDMEFILLGTGSSQPSKYRNVSSIFVNLFSKGGLLLDCGEGTLAQLKRRF
GVEGADSAVKDLRFIWISHIHADHHTGLARILALRSRLLKDVPHEPLLVIGPRPLKRFLD
AYSRLEDLDMQFLDCRHTTEASLDPQKDNHKPLQATLFAKGSRMESYWNRPGSPVDTAVV
LPLVMRLKSILHDAGLEALYSVPVIHCPQAFGVVLKAAERKNNTGKAIPGWKLVYSGDTR
PCQSLIDASSGATVLIHEATFEDGMDEEAITKNHSTTKEAIAVGASAGAYRVVLTHFSQR
YPKVPVFDEVHMDRTCIAFDLMSVNAADLHVLPKVLPYLKVLFRNEMSIDESDEVLDVAV
QQ
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgctccacatctcaagcctcaagcttctatcctcaacccctctcctcaaactccccttc
tcctctccctcttctctcttcttcaaccctaaaaccccatcaaaactccatcactcccac
ttcacagtcctctcctattacagtcgcagggacaggaggaaaggacgagggggctctgcc
cctcagagaagagggaggagcactattacagaggtcgagatggaggagaagaaggaagcg
atggggggattcaataagaggagggcggaggggagagatgcaggggggaagcggaggaat
ttgcagcagaaggttcagagattgaatccagttagcactatctgttacgttcagataatg
ccacaaattagcctatttctgttagaaattgctggtgttcaggattttgtgcccccttct
tgtgccttgagctcatcctggatctgcgcagcattactgaagttatatcagctcgcacac
tattacttttgcaggctaggtttgcagcggttctgcactgagcacaagatcaagttatcg
aagattgatcacatattcctaactcgtgtatgctcagagacagcaggcggacttccaggt
cttctattgactttagccggaattggggaagaagggatgtctgttaacatgtgggggccg
tctgatcttaaatatttggttgatgcaatgaaatcatttattccacatgctgccatggtt
tgcgcgcacagctttggagagacccaagataaaagtgaggttgctgtttcatttcctgat
accggcaggatcacagatcccattgttctcattgatgacgaggtggtgcgactgtcagct
attccactaagaccatcccaatctaataatggttctacactaaagcctggtgatattgca
gttgtctatgtctgtgaattgccagaaattaaggggaagtttgacccagttaaagcttca
tctctaggactgaaaccaggtccaaaatatcgcgaactgcaacttggaaagtcagtaatg
tcagattatcaagacattatggttcaaccaagtgatgttcttggtccttcagtgcctggt
ccaatcgtgcttattgttgactgcccaacctcagaccatatgctggaattgttttctctg
cagtctcttgaatgttactatgttgactctactgatcacaaaggggagggcattaaacat
gtgaattgtgtaattcacatgagtcccgcttctgtaacgagggatgcagattatcaaaag
tggatgagaatgtttggcatcacgcagcacatcatggcaggccatgaaattaaaaacatg
gaaatccctattctcaaagctagtgcaagaatttcatcaagactgaactatctatgccct
ccgttctttcctgctccaggattttggtctcttaacaatatcaatttctttccacatccc
aatggttcttgtgaggaaccttctccagattctggtaatcaggtttcagctgaaaatctt
ctaaagtttcatctgcgcccctatgctcaactgggcttggaccgctctgctattccaagc
ttgttaaatcacaaagacattgttgatgaacttctttcagaaattcctgaaatagttgat
atttcaaaatatctccgtcaattttggactgcagagagtaaatctgcaatgtgtaaaaaa
gctgaaaatataactatggtggaagaaccatggataaatgaagctctatgcagtcctaat
tcaaaacttgaactgctaggatctaaagaacatttaaatgcaaccgaaaagaattctgat
atcccgccttgtttggagaatataacaagagaggacatggaatttattctcctaggtaca
ggttcatcacaaccatccaaataccgcaatgtcagttctatcttcgtcaatcttttctcg
aaaggaggtttacttctagactgtggagaaggaactttagcacaattgaaaagaagattt
ggagtggagggtgctgacagtgcggttaaagatttaagatttatttggatttctcacatt
catgctgatcatcacactggtctcgccagaatacttgcattaaggtcgcggttgctgaag
gatgtgcctcatgaacctttgcttgtgattgggccgagaccattgaagagatttttagat
gcttactctagacttgaagatttggatatgcaattcttggattgtaggcatacaactgaa
gctagcctggatcctcaaaaggataatcataaacctttgcaagctacattatttgctaaa
ggcagtagaatggaaagttattggaacaggcctgggagcccagttgatactgcagtcgtt
ctaccacttgtaatgagattgaaatcaattctacatgatgcgggtttagaagctctatat
agtgtccctgttatacattgccctcaggcatttggtgttgtcctgaaggctgctgagaga
aaaaataacactggaaaagctataccaggttggaagcttgtctattccggtgatactaga
ccttgtcaatctctgatagatgcatcttctggtgcaacagttcttatacatgaggcaaca
ttcgaggatggcatggacgaggaagcaataacgaagaatcatagcacaacgaaggaagct
atagcggtgggtgcatcagcaggtgcatatcgggttgtactcacccattttagtcagagg
tacccgaaagttcccgtatttgatgaggtccacatggatagaacatgtattgcttttgat
ctaatgagcgtcaatgcagcagacttgcatgttcttccaaaggttcttccgtaccttaaa
gttcttttcagaaatgaaatgagtatcgatgaatctgacgaagtgttagatgtcgcagtg
caacaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system