KEGG   Asparagus officinalis (garden asparagus): 109848714
Entry
109848714         CDS       T05243                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13]
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03013  Nucleocytoplasmic transport
aof03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109848714
   03015 mRNA surveillance pathway
    109848714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109848714
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109848714
SSDB
Motif
Pfam: DEAD Helicase_C AAA_22
Other DBs
NCBI-GeneID: 109848714
NCBI-ProteinID: XP_020273955
Position
1:complement(9265740..9276091)
AA seq 503 aa
MADDSSSAASTAAVSEKKPEGKKSWADEAEEESAASVSSSAASADSSDAKNGKGEKTEEE
LKKIESLSISDSPDGPQLDDPDDSDIKAVTSGDTVYTSAVRFEDLNLSSELIKGLYIEMG
FSKPSKIQAVTLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPNKGVPQAFCICPT
RELAQQNQAVLMKMGKYTGITSFLAISTDASSYVPVAKCPPVTDQVVIGTPGTIKKWTSA
KKLGTRDVKILVFDEADHMLAEDGFRDDSLRIIREIRRNGNCQVLLFSATFDETVKEFVS
RVAPDGNQIFVKKEDLTLDKVKQYKVHCPDELAKMGVIKDKIFEYGQKVGQTIIFVRTRE
SARMLHQELAKEGYKCTSIQGAAKQDERDKIIKEFKDGLTTVLITTDLLARGFDQSQVNL
VVNFDLPVKYLSPQDPDCEVYLHRIGRAGRFGRKGAAFNLLCTERDKIVMEKIERHFNSV
VREVPNWRSDEDFEAALKDAGLL
NT seq 1512 nt   +upstreamnt  +downstreamnt
atggccgacgacagcagctccgccgcctccaccgcagccgtctctgagaagaaaccagaa
gggaagaagtcgtgggcagacgaagcagaggaagaatccgccgcctccgtgtcctcctcc
gccgcctccgccgactcttcggatgccaagaacggcaaaggggagaaaactgaggaggag
ttgaagaagatcgagtccctctcgatctctgacagtcccgatggacctcagttggacgat
cctgatgattccgatatcaaggcggttacatcaggtgacactgtttacacatctgctgtg
aggtttgaagatttaaatctgtcgagcgagttgatcaaaggactatacattgaaatgggt
ttcagtaagcctagcaagatacaggctgtgacactacccatgattcttactccaccctat
aaagatcttgtggctcaggcacacaatggttcaggaaaaaccacgtgtttcgttcttggt
atgctgagccgagttgatcctaataaaggggtgcctcaagcattctgcatatgtcctaca
agagagctagcacaacagaaccaggcggtccttatgaagatgggaaagtacaccggcata
acttcatttcttgctatttcaacggatgcttctagttatgttccggtcgcaaaatgtccc
ccagttactgatcaagtcgtgattggcaccccgggtacaatcaagaagtggacgtccgca
aaaaagttaggcactcgggatgtgaagatacttgtttttgatgaggctgatcacatgttg
gctgaggatggtttcagagatgactccttgaggatcataagagagatacgaagaaatggc
aactgccaggtgctcctattctcagccacctttgatgaaactgtgaaggaatttgtatca
agggtagcaccggatggaaatcagattttcgtgaagaaagaagaccttactctagataaa
gttaagcaatataaggtccattgtccagatgaacttgccaaaatgggagtaataaaggat
aaaatctttgaatacggacaaaaggtgggtcaaacaattatatttgttcgcacaagggaa
agtgctaggatgttacatcaggagttggctaaggagggttacaagtgtacatctatacaa
ggtgccgcgaaacaagatgagcgggacaaaattataaaggaatttaaagatggattaacc
acagtcctcattacaactgatctccttgctcgaggttttgatcaatcgcaggtcaacttg
gtcgttaactttgatcttcctgttaagtacctctctcctcaagatcctgattgtgaggtg
tacttgcatagaattggtagggcaggacgttttggacgaaaaggtgctgcgttcaacctg
ctgtgcacagagagggacaagattgtcatggaaaaaattgagcgccatttcaatagtgtt
gttcgtgaggtgcctaattggcgaagtgacgaggactttgaggctgcccttaaagatgca
ggccttctttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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