KEGG   Asparagus officinalis (garden asparagus): 109849473
Entry
109849473         CDS       T05243                                 
Name
(RefSeq) THO complex subunit 7B-like
  KO
K13176  THO complex subunit 7
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109849473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109849473
   03041 Spliceosome [BR:aof03041]
    109849473
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109849473
Spliceosome [BR:aof03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109849473
SSDB
Motif
Pfam: THOC7 SAB Sec8_N Shugoshin_N RACo_linker APG6_N
Other DBs
NCBI-GeneID: 109849473
NCBI-ProteinID: XP_020274898
Position
7:114949570..114962616
AA seq 241 aa
MLPKVRKAGGREETAAHYAFGPVEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFISFALEV
EKDSDNYGDCERLYKALLQEMATFELPLLKSKAVVDANQREKESFNELQEQIQHQILQAQ
ADIEELKKQLEESKIERKHKEECEAIRRLIALQPARSETQKVISDLEKEISSLEAENIAG
MRTLDLRRKQFSLLLHVVDELQNTIQDEQKGLTDELRAVVEETKTGFEDGSGGGSEAMSV
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atgttaccaaaagtgaggaaagctggcgggagggaagaaactgcagcacactatgccttt
ggtcccgttgaagatgatgtgatcatcaaacacaggcttctaacacgaaccaccactaca
aggggggagccgccattaaagaagcttcagaaaaaattcatatcatttgcattagaagtc
gagaaggactcagataactatggtgactgcgagagactttataaggcattgttgcaagag
atggccacttttgagctgcctctgcttaagagcaaagctgttgttgatgcgaaccaacga
gagaaagagagctttaatgagcttcaggagcaaatacagcaccagatcttgcaagctcag
gctgatattgaagagctaaagaagcagctggaggagagcaagatcgagaggaagcacaag
gaggagtgtgaggcaataaggagactgattgctttgcaaccagcaaggtctgaaactcag
aaggtcatatctgacctcgagaaggaaatatcatccttggaggctgagaatattgctggc
atgaggacactggatctcaggagaaagcagttctctcttctgttgcatgtggtcgatgag
ctgcagaacaccattcaggatgagcagaagggtttgaccgatgagctgagggccgtcgtg
gaagaaaccaagactggctttgaagatggcagtggtgggggctcagaggccatgtcggtt
gactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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