KEGG   Amycolatopsis keratiniphila: AORI_5144
Entry
AORI_5144         CDS       T02678                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
aoi  Amycolatopsis keratiniphila
Pathway
aoi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aoi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AORI_5144 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aoi03400]
    AORI_5144 (uvrB)
DNA repair and recombination proteins [BR:aoi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AORI_5144 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AORI_5144 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_30 AAA_5 AAA_16 HEM4 DUF87 UvrD-helicase UB2H ZapA AIG1
Other DBs
NCBI-ProteinID: AGM07728
UniProt: R4TB72
Position
complement(5718546..5720702)
AA seq 718 aa
MAFASEHPVLAQSDFRPVTDIPRTGGRFEVVSEYKPAGDQPAAIDELERRINAGEKDVVL
LGATGTGKSATTAWLIERVQRPTLVMAPNKTLAAQLANELRELFPHNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINDDVERLRHSATMNLLSRRDVIVVASVSCIYGLGTPQSYLDR
STKLKVGEQLDRDVFLRALVDVQYTRNDIAFARGTFRARGDTVEIIPAYEELAIRVEFFG
DEIEKLYYLHPLTGDIVKEVDEVRIFPATHYVAGPERMEKAIRGIEAELEERLAELEKQG
KLLEAQRLRMRTAYDIEMMRQVGFCSGIENYSRHIDGRAAGSAPATLIDYFPDDFLLVID
ESHQTVPQIGGMFEGDMSRKRNLVDFGFRLPSAVDNRPLTWEEFSDRIGQTVYLSATPGP
YEMGQAGGEFVEQVIRPTGLVDPKVVVKPTEGQIDDLVHEIRERAEKDERVLVTTLTKKM
AEDLTDYLLELGIRVRYLHSEVDTLRRVELLRQLRAGDFDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSGTSLIQTIGRAARNVSGEVHMYADKITDSMQHAIDETDRRRAKQVAY
NEERGVDPQPLRKKIADILDRVYSEAEDTESVAVGGSGRNSSRGKKPEQGDRVRSSGMLA
DKDVAGMPRAELADLIQQMTDQMMQAARDLQFELAARLRDEVADLKKELRGMDAAGIK
NT seq 2157 nt   +upstreamnt  +downstreamnt
gtggctttcgcatccgaacaccccgtgctcgcccagtcggacttccgccccgtcacggac
atcccccggaccggcggccggttcgaggtggtcagcgagtacaagcccgccggtgaccag
ccggcggccatcgacgagctcgaacgccggatcaacgccggcgagaaggacgtcgtgctg
ctcggtgccacgggtaccggcaagtcggcgacgacggcttggctgatcgagcgcgtccag
cgcccgacgctggtcatggcgccgaacaagacgctcgccgcgcagctggcgaacgagctg
agggagctgttcccgcacaacgcggtcgaatacttcgtcagttactacgactactaccag
cccgaggcgtacatcgcgcagacggacacctacatcgagaaggactcgtcgatcaacgac
gacgtcgagcggctgcggcactcggcgacgatgaacctgctgtcccggcgggacgtcatc
gtggtcgcgagtgtctcgtgcatctacggcctcggcacaccgcagtcgtacctcgaccgg
tcgacgaagctgaaggtcggcgagcagctcgaccgcgacgtcttcctccgcgcgctggtg
gacgtgcagtacacccgcaacgacatcgccttcgcgcgcggcaccttccgcgcccgcggc
gacacggtcgagatcatcccggcgtacgaggagctggcgatccgcgtcgagttcttcggc
gacgagatcgagaagctgtactacctgcacccgctcaccggcgacatcgtgaaagaggtc
gacgaggtccgcatcttcccggccacgcactacgtcgcgggcccggagcggatggagaag
gccatccgcggcatcgaggccgagctggaggagcggctggccgagctggagaagcagggc
aagctgctcgaggcgcagcggctgcggatgcgcaccgcgtacgacatcgagatgatgcgc
caggtcgggttctgctccggcatcgagaactactcgcggcatatcgacggccgggccgcc
gggtcggcgcccgccacgctcatcgactacttcccggacgacttcctgctggtcatcgac
gagtcgcaccagaccgtcccgcagatcggcggcatgttcgagggtgacatgtcgcggaag
cggaacctggtcgacttcggcttccggctgcccagcgcggtcgacaaccggccgctgacc
tgggaggagttcagcgaccggatcgggcagacggtgtatctgtcggcgacgccggggccg
tacgagatggggcaggcgggcggcgagttcgtcgagcaggtcatccggcccaccggcctg
gtcgacccgaaggtcgtcgtgaagcccaccgagggccagatcgacgacctggtgcacgag
atccgcgagcgggccgagaaggatgagcgcgtcttggtcaccacgctcaccaagaagatg
gccgaggacctcaccgactacctgctggagctgggcatccgggtgcggtacctgcactcc
gaggtggacacgctgcgccgggtcgagctgctgcggcagctgcgcgcgggcgatttcgac
gtactggtcggcatcaacctgctccgtgagggtctcgacctgcccgaagtgtcgctggtc
gcgatcctcgacgccgacaaggagggcttcctccgcagtggcacgtcgctgatccagacg
atcggccgcgcggcgcgaaacgtgtcgggcgaggtgcacatgtacgcggacaagatcacg
gactcgatgcagcacgccatcgacgagaccgatcgccgccgcgccaagcaggtcgcctac
aacgaggagcggggcgtcgatccgcagccgctgcggaagaagatcgccgacatcctggac
cgcgtgtacagcgaggccgaggacacggagtccgtcgccgtcggcggttcgggccggaac
tcctcgcgcggcaagaagcccgagcagggcgaccgcgtccgcagctccgggatgctcgcg
gacaaggacgtcgccgggatgccgcgcgccgagctggccgacctcatccagcagatgacc
gaccagatgatgcaggccgcgcgcgacctgcagttcgaactggcggcccggctgcgtgac
gaagtcgcggacctcaagaaggagctccggggaatggacgcggccggcatcaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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