KEGG   Agromonas oligotrophica: S58_17960Help
Entry
S58_17960         CDS       T02484                                 

Definition
ATP-dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
aol  Agromonas oligotrophica
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:aol03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:aol03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:aol03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:aol03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2057235..2059964
Genome map
AA seq 909 aa AA seqDB search
MALRKLSTYRKKRDFDKTAEPSGDAKIARAERPRFVIQKHDATRLHYDLRLEFGGVFKSW
AVTKGPSLDPHDKRLAVEVEDHPLDYGDFEGTIPEGEYGGGTVMLWDRGYWESENPERGF
EKGDLKFTLDGDKLRGSWVLVRMRHDRTGGKRTNWLLIKHRDEFAREGEANDILDADKSV
ASGRTMEQIAAGKGKAPKPFMLDKAQRMNADAVWRSNRSDSKPSSKHVSASKPKISKSKA
SKPKASKKATEAGEEPKAVAPRTVASLPDFVPPELCTSVAQPPSGEGWAHEIKFDGYRVQ
IRVENGEVTLKTRKGLDWTAKFGAIAEEAAKLPDAIIDGEIVALDKDGNPNFSALQAAIS
AGQTDELIFFAFDLMFAEEFDLRRQPLRERKARLAKLLKASIKGKAPRIRYVEHFETDGE
TVLDSARKLSLEGIVSKKLDSAYHSGRTESWTKAKTRPGHEVVIGGWKTTNGKFRSLMVG
VNKDDHLAYVGIVGTGFGQDTVNEIMPALKAAASDKSPFGGKNAPRRVREVHWLKPELVA
EIEFAGFTGDGNVRQASFKGLRQDKPAREVVAEEPVVTTKVAKPVARAAATVATGGTTVH
KTPSRSKSAATVMGIAISKPDKALWPDAGDGEPVTKLDLANYLEAVGDWMIGHLKGRPCS
IVRAPDGIGGEKFFQRHGMQGMSDLLELVKVSGDRKPYLQIDRVEGLIAVAQVAAVELHP
WNCAPDVYDVPGRLVFDLDPAPNVAFEEVIAAAKEMRQRLTSLGLESFCKTTGGKGLHVV
TPLRYGARDKVTWPEAKAFAQGVCQWMANDNPDQYLLNMSKKLRKGKIFLDYLRNDRMST
SVAVLSPRAREGATVSMPLTWAQVKNGLDAKRYTIRTVPALLSKAKAWDGYDEAAGSIKP
AIKKLASAS
NT seq 2730 nt NT seq  +upstreamnt  +downstreamnt
gtggcgctcaggaagctctccacctaccgcaagaagcgcgatttcgacaagaccgcggag
ccgtcgggtgacgccaagatcgcgcgcgctgaacggccgcgcttcgtcatccagaagcac
gacgcaacgcggctgcattacgatctgcggctggaattcggcggtgtgttcaagtcgtgg
gccgtgaccaaggggccttcgctcgatccgcacgacaagcggctcgcggtcgaggtcgag
gatcatccgctcgactacggcgatttcgaaggcacgataccggaaggcgagtatggcggc
gggaccgtgatgctgtgggaccgcggctattgggaaagcgaaaatcccgagcgcggcttc
gagaagggcgacctcaagttcaccctcgacggcgacaagctgcgtggcagctgggtgctg
gtgcggatgcgccatgatcgcaccggcggcaagcgcaccaattggctgctgatcaagcac
cgcgacgagttcgcccgcgagggcgaggccaacgatatcctggatgcggacaagtccgtc
gcctcgggacgcacgatggagcagattgcggccggcaagggcaaggcgccgaagccgttc
atgctggacaaggcgcagcgcatgaatgccgatgcggtctggcgctcgaaccgcagcgac
agcaagccgtcgtcgaaacatgtttcagcgagcaagcccaagattagcaaatccaaggcg
agcaaacccaaggcaagcaagaaggcgaccgaggccggggaggagccgaaggccgtggcc
ccgcggacggtggcgtcgttgccggacttcgtgccgcccgagctctgcacgtccgtggcg
caaccgccgagcggcgagggctgggcgcacgagatcaagttcgacggctatcgcgtgcag
atcagggtcgagaacggcgaggtgacgttgaagacccgcaaaggcctggactggaccgcc
aagttcggcgcgatcgccgaggaagcggccaagctgccggacgcgatcatcgatggcgag
atcgtcgcgctcgacaaggacggcaatccgaatttttctgcactgcaggcggcgatatcg
gccggtcagaccgatgagctgatcttctttgcgttcgacctgatgtttgcggaggagttc
gatctgcgccgccagccgctgcgcgaacgcaaggcgcggctcgcgaagctgttgaaggcg
agcatcaaaggcaaggcgccccgcatccgctatgtcgaacacttcgagacggatggcgag
accgttctcgattccgctcgcaagctgtcactggaaggcatcgtctcgaagaagctcgac
tcggcctatcattcgggacggaccgagagctggaccaaggccaagacgcggcccgggcac
gaggtcgtcatcggcggctggaagaccaccaacggcaaattccgctcgctgatggtcggc
gtcaacaaggacgatcatctcgcttatgtcggcatcgtcggcaccggcttcggccaggac
acggtgaacgagatcatgccggcgctgaaggcggcggcgtcggacaagagtccgttcggc
ggcaagaacgcgccgcgtcgggtgcgcgaggtgcattggctgaagccggagctcgtcgcc
gagatcgagtttgctggcttcaccggtgacggcaatgtcaggcaagcctcgttcaagggg
ctgcgtcaggacaagccggcgcgcgaggtcgtcgccgaggagccggtggtgacgaccaag
gttgccaagccggtggcgcgggccgcggccacggtcgcgaccggcggcacgaccgtgcac
aagacgccgtcgcgatcgaagagcgcggcgaccgtgatgggcattgcgatctccaagcct
gacaaggcgctgtggccggacgccggtgacggcgagcccgtcaccaagctcgatctcgcc
aactatctggaagccgtcggcgactggatgatcggccatctcaaggggcggccgtgctcg
atcgtgcgtgcgccggatggcatcggcggcgagaaatttttccagcgtcacggcatgcag
ggcatgtcggacctgctggagctggtcaaggtctcgggcgaccgcaagccgtatctgcag
atcgatcgcgtcgagggattgatcgcggtagcgcaggtcgcggccgtcgagctgcatccg
tggaattgcgcgcccgatgtctacgacgtgccgggccggctggtgttcgatctcgatccg
gcgccgaacgtcgccttcgaggaggtgatcgcggccgccaaggagatgcggcagcggctg
acgagccttggtctggagagcttctgcaagaccacgggcgggaaagggctgcacgtcgtg
acacccttgcgctacggcgcgcgcgacaaggtgacgtggccggaggcgaaggcgtttgcg
cagggcgtgtgccagtggatggccaacgataatccggatcagtatctgctgaacatgtcg
aagaagctgcgcaagggaaagatcttcctggactatctgcgcaacgaccggatgtcgacc
tcggtcgcggtgttgtcgccgcgggcgcgcgaaggcgcgacggtgtcgatgccgctgacc
tgggcgcaggtcaagaacgggctcgatgccaagcgctacacaatccgcacggtcccggct
ctgctctccaaggccaaggcgtgggacggttatgacgaggccgccggatcgatcaagccc
gcgatcaagaagctcgcaagtgcatcatag

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