KEGG   Bradyrhizobium oligotrophicum: S58_17960Help
Entry
S58_17960         CDS       T02484                                 

Definition
ATP-dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
aol  Bradyrhizobium oligotrophicum
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aol00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    S58_17960
   03420 Nucleotide excision repair
    S58_17960
   03430 Mismatch repair
    S58_17960
   03450 Non-homologous end-joining
    S58_17960
Enzymes [BR:aol01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     S58_17960
DNA repair and recombination proteins [BR:aol03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      S58_17960
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2057235..2059964
Genome map
AA seq 909 aa AA seqDB search
MALRKLSTYRKKRDFDKTAEPSGDAKIARAERPRFVIQKHDATRLHYDLRLEFGGVFKSW
AVTKGPSLDPHDKRLAVEVEDHPLDYGDFEGTIPEGEYGGGTVMLWDRGYWESENPERGF
EKGDLKFTLDGDKLRGSWVLVRMRHDRTGGKRTNWLLIKHRDEFAREGEANDILDADKSV
ASGRTMEQIAAGKGKAPKPFMLDKAQRMNADAVWRSNRSDSKPSSKHVSASKPKISKSKA
SKPKASKKATEAGEEPKAVAPRTVASLPDFVPPELCTSVAQPPSGEGWAHEIKFDGYRVQ
IRVENGEVTLKTRKGLDWTAKFGAIAEEAAKLPDAIIDGEIVALDKDGNPNFSALQAAIS
AGQTDELIFFAFDLMFAEEFDLRRQPLRERKARLAKLLKASIKGKAPRIRYVEHFETDGE
TVLDSARKLSLEGIVSKKLDSAYHSGRTESWTKAKTRPGHEVVIGGWKTTNGKFRSLMVG
VNKDDHLAYVGIVGTGFGQDTVNEIMPALKAAASDKSPFGGKNAPRRVREVHWLKPELVA
EIEFAGFTGDGNVRQASFKGLRQDKPAREVVAEEPVVTTKVAKPVARAAATVATGGTTVH
KTPSRSKSAATVMGIAISKPDKALWPDAGDGEPVTKLDLANYLEAVGDWMIGHLKGRPCS
IVRAPDGIGGEKFFQRHGMQGMSDLLELVKVSGDRKPYLQIDRVEGLIAVAQVAAVELHP
WNCAPDVYDVPGRLVFDLDPAPNVAFEEVIAAAKEMRQRLTSLGLESFCKTTGGKGLHVV
TPLRYGARDKVTWPEAKAFAQGVCQWMANDNPDQYLLNMSKKLRKGKIFLDYLRNDRMST
SVAVLSPRAREGATVSMPLTWAQVKNGLDAKRYTIRTVPALLSKAKAWDGYDEAAGSIKP
AIKKLASAS
NT seq 2730 nt NT seq  +upstreamnt  +downstreamnt
gtggcgctcaggaagctctccacctaccgcaagaagcgcgatttcgacaagaccgcggag
ccgtcgggtgacgccaagatcgcgcgcgctgaacggccgcgcttcgtcatccagaagcac
gacgcaacgcggctgcattacgatctgcggctggaattcggcggtgtgttcaagtcgtgg
gccgtgaccaaggggccttcgctcgatccgcacgacaagcggctcgcggtcgaggtcgag
gatcatccgctcgactacggcgatttcgaaggcacgataccggaaggcgagtatggcggc
gggaccgtgatgctgtgggaccgcggctattgggaaagcgaaaatcccgagcgcggcttc
gagaagggcgacctcaagttcaccctcgacggcgacaagctgcgtggcagctgggtgctg
gtgcggatgcgccatgatcgcaccggcggcaagcgcaccaattggctgctgatcaagcac
cgcgacgagttcgcccgcgagggcgaggccaacgatatcctggatgcggacaagtccgtc
gcctcgggacgcacgatggagcagattgcggccggcaagggcaaggcgccgaagccgttc
atgctggacaaggcgcagcgcatgaatgccgatgcggtctggcgctcgaaccgcagcgac
agcaagccgtcgtcgaaacatgtttcagcgagcaagcccaagattagcaaatccaaggcg
agcaaacccaaggcaagcaagaaggcgaccgaggccggggaggagccgaaggccgtggcc
ccgcggacggtggcgtcgttgccggacttcgtgccgcccgagctctgcacgtccgtggcg
caaccgccgagcggcgagggctgggcgcacgagatcaagttcgacggctatcgcgtgcag
atcagggtcgagaacggcgaggtgacgttgaagacccgcaaaggcctggactggaccgcc
aagttcggcgcgatcgccgaggaagcggccaagctgccggacgcgatcatcgatggcgag
atcgtcgcgctcgacaaggacggcaatccgaatttttctgcactgcaggcggcgatatcg
gccggtcagaccgatgagctgatcttctttgcgttcgacctgatgtttgcggaggagttc
gatctgcgccgccagccgctgcgcgaacgcaaggcgcggctcgcgaagctgttgaaggcg
agcatcaaaggcaaggcgccccgcatccgctatgtcgaacacttcgagacggatggcgag
accgttctcgattccgctcgcaagctgtcactggaaggcatcgtctcgaagaagctcgac
tcggcctatcattcgggacggaccgagagctggaccaaggccaagacgcggcccgggcac
gaggtcgtcatcggcggctggaagaccaccaacggcaaattccgctcgctgatggtcggc
gtcaacaaggacgatcatctcgcttatgtcggcatcgtcggcaccggcttcggccaggac
acggtgaacgagatcatgccggcgctgaaggcggcggcgtcggacaagagtccgttcggc
ggcaagaacgcgccgcgtcgggtgcgcgaggtgcattggctgaagccggagctcgtcgcc
gagatcgagtttgctggcttcaccggtgacggcaatgtcaggcaagcctcgttcaagggg
ctgcgtcaggacaagccggcgcgcgaggtcgtcgccgaggagccggtggtgacgaccaag
gttgccaagccggtggcgcgggccgcggccacggtcgcgaccggcggcacgaccgtgcac
aagacgccgtcgcgatcgaagagcgcggcgaccgtgatgggcattgcgatctccaagcct
gacaaggcgctgtggccggacgccggtgacggcgagcccgtcaccaagctcgatctcgcc
aactatctggaagccgtcggcgactggatgatcggccatctcaaggggcggccgtgctcg
atcgtgcgtgcgccggatggcatcggcggcgagaaatttttccagcgtcacggcatgcag
ggcatgtcggacctgctggagctggtcaaggtctcgggcgaccgcaagccgtatctgcag
atcgatcgcgtcgagggattgatcgcggtagcgcaggtcgcggccgtcgagctgcatccg
tggaattgcgcgcccgatgtctacgacgtgccgggccggctggtgttcgatctcgatccg
gcgccgaacgtcgccttcgaggaggtgatcgcggccgccaaggagatgcggcagcggctg
acgagccttggtctggagagcttctgcaagaccacgggcgggaaagggctgcacgtcgtg
acacccttgcgctacggcgcgcgcgacaaggtgacgtggccggaggcgaaggcgtttgcg
cagggcgtgtgccagtggatggccaacgataatccggatcagtatctgctgaacatgtcg
aagaagctgcgcaagggaaagatcttcctggactatctgcgcaacgaccggatgtcgacc
tcggtcgcggtgttgtcgccgcgggcgcgcgaaggcgcgacggtgtcgatgccgctgacc
tgggcgcaggtcaagaacgggctcgatgccaagcgctacacaatccgcacggtcccggct
ctgctctccaaggccaaggcgtgggacggttatgacgaggccgccggatcgatcaagccc
gcgatcaagaagctcgcaagtgcatcatag

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