KEGG   Candidatus Puniceispirillum marinum: SAR116_0241
Entry
SAR116_0241       CDS       T01207                                 
Name
(GenBank) sarcosine oxidase, alpha subunit family
  KO
K22086  methylglutamate dehydrogenase subunit C [EC:1.5.99.5]
Organism
apb  Candidatus Puniceispirillum marinum
Pathway
apb00680  Methane metabolism
apb01100  Metabolic pathways
apb01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:apb00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    SAR116_0241
Enzymes [BR:apb01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.99  With unknown physiological acceptors
    1.5.99.5  methylglutamate dehydrogenase
     SAR116_0241
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C FAD_oxidored NAD_binding_8 FAD_binding_2 Pyr_redox_2 DAO GIDA Thi4 HI0933_like Pyr_redox_3 AlaDh_PNT_C FAD_binding_3
Other DBs
NCBI-ProteinID: ADE38484
UniProt: D5BPK2
Position
complement(254983..257955)
AA seq 990 aa
MSHFTNQPNRLDSGGMIDRTKLIEFTFDGKKFDGFEGDTLASALLANNVRLMGRSFKYHR
PRGVMTAGSEEPNAIVELRSGARQEPNSRATVTELFDGLEARSQNRWPSLQFDAMAINDL
FSNFLTAGFYYKTFMWPAAFWEKLYEPIIRNAAGLGSLSTKADPDSYDKGFLHCDLLIIG
AGPSGLTAALTAARAGADIIIADEDFVLGGRLTAETYEIGDASCADWALETIAELNSMSN
VRCMPRTTVIGAFDHGVYGAVERISDHLAVPTDGKPRQVLWRIYSKRAVLAGGAIERPIC
FPNNDRPGIMQASAIRSYVNRWASTPASQIAIFTNNDNGYRTATDLRDKGIDVSAIIDTR
PDAPKCEGIEVLAGGRVVDTSGRLGLNAITVRMNNGTTRTIKCGALGVAGGWNPNVHLTC
HQRGFPQWQQDIAAFVPGGTLPVGLGVAGAANGQFSLDSCLSSGVQSAVTLLADIDIKAK
AIKLPKAEDAPIKLMPFWHVGYGKKRAWVDQQNDVTVKDIKLAHQENFRSVEHLKRYTTL
GMATDQGKTSNISGLAIMAELSGKSIPDVGTTIFRPPYTPTAIGVMAGRARDRHFRPTRL
TPSHKWAEEQGAVFVEAGMWLRAQWYPQPGETHWRESVDREVLATRASVGVCDVTSLGKI
DIQGRDATTFINRVYANGFAKLPIGKTRYGLMLREDGIVMDDGTTARLAESHYVMTTTTA
NAVGVFRHLEFCRQCLWPDLDVQLISTTESWAQYAIAGPNARKLLEKIIDPEFDLSNDAF
PFMACGKVTVCGGLRARLFRISFSGELAYELAVPTRYGDALIRRIMEAGEAYDIVPYGTE
ALGVMRIEKGHAAGNELNGTTTALNLGLGRMVSATKDSIGSVLSRREGLTQKDAIIQIGL
KPVNDADALDAGAHLMRVDDPVNAAHDQGYVTSVCYSPSLGHAIGLGFLSNGSNRMGEII
RAVNPLQGREILVEVVSPHFIDPEGKRLHA
NT seq 2973 nt   +upstreamnt  +downstreamnt
atgagtcactttacaaatcaacctaaccgactagacagtggcggtatgattgaccgtaca
aagttgattgaatttacctttgacggtaaaaaatttgatggttttgagggtgatacgcta
gcatctgccttgctcgccaacaatgtcagattaatgggacgatcattcaaataccatcgc
ccacgaggggttatgacggccggatccgaagaacccaacgccatcgttgaactgcgttca
ggcgcacgccaagagcctaatagccgcgccaccgttaccgaattattcgacgggcttgaa
gccagaagccagaaccgctggccatcgttacaatttgatgccatggccataaatgatctg
ttttcaaattttctgacagctggattttattacaaaacatttatgtggcctgcggctttt
tgggaaaagctttatgaacccatcatccgcaacgcggcgggattgggatcattatcaaca
aaagctgatccagatagctatgataaagggtttttacattgcgatctgttgatcattgga
gctggaccatctggcctcactgccgcgctaaccgcagcccgtgctggtgctgatatcatc
atagctgatgaagactttgtactaggcggcagactgactgccgaaacctatgaaataggt
gacgcctcctgtgctgactgggcgctagaaacaattgccgaacttaattcaatgagcaat
gtgcgctgtatgccacgcaccacagttattggcgcctttgatcatggtgtttatggcgct
gtcgagcgcatatcagatcatcttgccgttccgacagacggtaaaccacgtcaggtgttg
tggcgtatttattccaaacgggcggttctggcgggcggtgccatcgagcggccaatatgt
ttccccaataatgaccgtcctggcataatgcaggcaagtgccatccgttcctatgttaat
cggtgggctagcacaccggcatcacaaatcgccatctttaccaataatgacaatggttac
cgcaccgctaccgatttacgtgacaaaggcattgatgtcagcgcgatcattgacacgaga
cccgacgcgcctaaatgtgagggtattgaggttctggctggtggacgcgttgttgacacc
tctggacgacttggcctgaatgccatcactgttcgcatgaataatggcacaacacgcacc
atcaaatgcggtgcacttggggttgctggcggctggaatcccaatgtgcatctaacctgc
catcaacgtggctttccgcaatggcaacaagatattgcagcctttgttcccggtgggaca
ttgcctgttggtctgggtgttgctggcgcggctaatggccaattcagccttgattcatgt
ttgtcatccggcgttcaatcagctgttaccttgcttgcagatattgatattaaggcaaaa
gcaatcaaattacccaaagccgaagatgcacctatcaaacttatgccattctggcatgtc
ggctatggcaagaaaagagcttgggttgaccagcagaacgatgtgacagtcaaagatata
aagctggcgcatcaggaaaatttccgttctgtcgaacatttaaagcgatacaccacatta
ggcatggcaactgaccaaggaaaaacatccaatatttctggcttggcgatcatggctgaa
ctttcgggaaaatccattcccgatgttggcaccactattttccgcccaccttacacacca
acagccatcggcgttatggcagggcgcgcccgtgatcgtcatttccgccctacccgcttg
acgccatcgcataaatgggccgaagaacaaggtgccgtttttgtcgaagctggcatgtgg
ttgcgggcgcaatggtatcctcagccaggcgaaacccattggcgcgaaagtgttgaccgt
gaggtcttggccacacgggcttcggttggtgtgtgtgatgtgacaagccttggcaagatt
gatattcaaggccgtgatgccacaacattcatcaatcgggtctatgctaacgggtttgca
aaattgccaataggcaagacacgatatggtctgatgctacgcgaagacggcattgtcatg
gatgatggtacaaccgcacgccttgccgagtcacattatgtcatgaccacaactactgct
aatgccgtaggggtgttcaggcatcttgaattctgccgtcaatgcctatggcctgatctt
gatgttcaactcatatcaacaaccgaaagctgggcgcaatatgccatcgctggccctaat
gcacgcaaacttcttgaaaagatcattgatccagaatttgacctgtccaatgacgccttt
ccatttatggcctgtggtaaagtcacagtatgcgggggattgcgcgcacgtctgttcaga
atttcattttctggagaactggcttacgaacttgctgttccgacgcgctatggtgatgcg
ctgatccggcgtatcatggaggctggtgaagcctatgatattgtgccttatggcaccgaa
gcgcttggtgtcatgcgcattgaaaaaggacacgccgctggtaacgaattaaatggcacg
accaccgcgctcaatttggggttaggccgcatggtatccgcaaccaaggacagcattggc
agtgtgctatcgcgccgagaaggtcttacgcaaaaagatgccatcattcagattggccta
aagccagtaaatgatgccgacgcccttgacgctggtgcccatctcatgcgggttgatgat
ccggtaaatgccgcccatgatcaaggctatgtcacatccgtttgttattcgcccagccta
ggtcatgcaattggccttggcttcctcagcaatgggtcaaaccgcatgggcgaaatcatc
cgcgctgtaaacccgctacagggacgcgaaattctagtcgaagttgttagcccacatttc
atcgatccagaagggaaacgcctccatgcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (118)   
   KEGG ORTHOLOGY (1)   
   RefGene (115)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (148)   

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