KEGG   Candidatus Puniceispirillum marinum: SAR116_1562Help
Entry
SAR116_1562       CDS       T01207                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
apb  Candidatus Puniceispirillum marinum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:apb00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SAR116_1562
Enzymes [BR:apb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SAR116_1562
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SAR116_1562
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1724097..1724930)
Genome map
AA seq 277 aa AA seqDB search
MPELPEVETVRSALAPVVTGQQVMAVYVGRKDLRWPLPEALDKQLLGCRFAAPTRRGKYV
LMPNDNGQVLLIHLGMSGSIRIHEAKPELAKHDHMMLTVEADDGGHRYIVLNDPRRFGWV
DLFAAEDMATHKLLKDMGPEPLGNAFSATHIQTVFANRKSPVKNALLDQRLIAGIGNIYA
CEALFKSGISPRRRAGSITAGRADKLAHAIVTVLRAAIAEGGTSLRDHVQPGGEIGYFVQ
KLSVYGRDGLPCVICETPIRIIVQSGRSSFYCPSCQR
NT seq 834 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaattgccagaagtcgaaacggtgcgcagtgcgctggcgcctgtggtcactggc
cagcaggtgatggcggtttatgttggccgcaaggatttgcgctggccattgcccgaagcg
ctggataagcagctgcttgggtgccgttttgccgcccccacccgacgcggcaaatatgtg
ctgatgccaaatgataacgggcaggtgctgttgatacatctgggcatgtccggatcaatc
cggattcatgaggccaaaccagagcttgccaagcatgaccatatgatgctgacggtggag
gcagatgatggggggcatcgttatattgtgttgaatgatccgcgccgttttggctgggtt
gatctgtttgccgctgaggatatggccacgcataaattgctcaaggatatggggccagaa
cccctgggcaacgcgttttcggcaacgcatatccaaaccgtatttgccaaccggaaaagc
cccgttaaaaacgccttgcttgatcagcggttgattgcgggcatcggcaatatctatgcc
tgtgaggcattgttcaaatccggcatatcgccgcggcgtcgtgccggatcgattaccgcc
ggtcgcgccgataaactggcgcatgccattgtcacggtgttgcgcgccgcgattgctgaa
ggcggcaccagtttgcgcgatcatgtccagcctggcggtgagatcggctattttgtgcag
aagctttcggtatatgggcgtgatggattgccctgtgtgatatgtgaaacgccgattcgc
ataattgtgcaatcggggcgcagtagtttttactgtccttcatgtcaacgctag

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