KEGG   Candidatus Puniceispirillum marinum: SAR116_1897
Entry
SAR116_1897       CDS       T01207                                 
Name
(GenBank) Chaperonin Cpn60/TCP-1
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
apb  Candidatus Puniceispirillum marinum
Pathway
apb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAR116_1897
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apb03019]
    SAR116_1897
   03110 Chaperones and folding catalysts [BR:apb03110]
    SAR116_1897
   03029 Mitochondrial biogenesis [BR:apb03029]
    SAR116_1897
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:apb04147]
    SAR116_1897
Enzymes [BR:apb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SAR116_1897
Messenger RNA biogenesis [BR:apb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SAR116_1897
Chaperones and folding catalysts [BR:apb03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SAR116_1897
Mitochondrial biogenesis [BR:apb03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SAR116_1897
Exosome [BR:apb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SAR116_1897
  Exosomal proteins of other body fluids (saliva and urine)
   SAR116_1897
  Exosomal proteins of breast cancer cells
   SAR116_1897
  Exosomal proteins of colorectal cancer cells
   SAR116_1897
  Exosomal proteins of bladder cancer cells
   SAR116_1897
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ADE40140
UniProt: D5BMU7
Position
2096743..2098392
AA seq 549 aa
MAAKEVKFGSEARTKMLEGVDILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKDI
ELKDRFQNMGAQMVREVASKANDVAGDGTTTATVLAQSIAQEGAKAVASGMNPMDLKRGI
DMAVEAVVEKIVAGSKTISTSDEVAQVGTISANGEEEIGKMIAEAMERVGNEGVITVEEA
KSLDTELDVVEGMQFDRGYLSPYFVTDAEKMRAVLEEPYILLHEKKLSNLQDMLPILEKV
VQSSRPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMMEDLAILTNGTV
VSEEVGIALDSLTLEMLGSAKRVEITKDETTIVDGSGDKTEIDARCNQIRAQAEESTSDY
DREKMQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDAMHATRAAVQEGIVPGGGVALV
RASVVLDGLKPANRDQEVGINIVRRALQAPARNIAENAGAEGSVIVGKLMESNDPNMGYD
AKNNEYTDMIKAGVIDPTKVVRSALQNAASVAGLLVTTEAMVAEKPEPKDPMPAAPDMGG
MGGMGGMGF
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggctgctaaagaagtcaaattcggatcagaagctagaacaaagatgctcgaaggtgtc
gatatcctagcgaacgccgttaaagtcacattgggtccaaaaggccgcaacgtggttttg
gaaaagtcttttggcgcaccacggatcaccaaagacggtgtgacagttgctaaagacatc
gaattgaaagacagattccagaatatgggcgcacagatggtgcgtgaagtggcgtcaaaa
gcgaatgacgtcgctggtgacggaacaacaaccgcaaccgttctggcgcaaagcattgcc
caggaaggcgcaaaagctgttgcatctggcatgaacccaatggatctgaaacgtggcatc
gacatggctgtcgaggctgttgttgaaaagatcgttgcaggttcaaagaccatttcaaca
tctgacgaagtggctcaggttggaaccatttcagccaatggtgaagaagaaatcggtaag
atgattgccgaagccatggagcgtgttggtaatgaaggtgtgatcaccgttgaagaagcc
aaaagcctcgacaccgaattggatgttgttgaaggtatgcagttcgaccgtggttacctg
tcaccttattttgtgacagatgccgagaaaatgcgcgccgtccttgaagagccgtatatt
ctgctacacgaaaagaaactttccaatctacaggacatgctgcctattctggaaaaagtt
gtccagtcaagccgtccattgttgatcatcgccgaagatatcgaaggcgaagctttggca
actttggttgttaaccgtcttcgtggtggcctgaaggttgctgcggtcaaggcacctggt
ttcggtgatcgccgcaaagccatgatggaagaccttgccattctaacgaacggcactgtc
gtatcagaagaagttggtattgcgcttgatagcctgacactcgaaatgctgggttctgcc
aagcgcgtcgagatcaccaaagacgaaacaacaatcgttgatggttctggtgacaagacc
gaaatcgacgcacgttgtaaccagattcgtgcccaggctgaagaaagcacatcagattat
gaccgtgagaagatgcaagagcgtttggccaaattggctggtggtgttgctgtgatcaag
gttggcggtgctactgaagtcgaagtgaaagagcgtaaagaccgtgttgacgatgcaatg
cacgcaacccgtgctgcggttcaagaaggtatcgtccctggcggcggtgttgcgcttgtt
cgtgcatcagtggttcttgatggcttgaagccagctaaccgtgatcaggaagttggcatc
aatatcgttcgccgcgcattgcaggctccggcccgtaatattgcggaaaacgctggtgct
gaaggttcggttatcgttggcaagctcatggaaagcaacgatccaaacatgggttacgat
gccaagaataacgaatataccgacatgatcaaagctggtgttatcgatccgactaaagtg
gttcgttcggctttgcaaaatgcggcatctgttgctggcctgctggttacaaccgaagct
atggttgctgaaaagccagagccaaaagatccaatgccagctgcccctgatatgggcggc
atgggcggtatgggtggcatgggcttctaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (510)   
   KEGG ORTHOLOGY (1)   
   RefGene (507)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (521)   

Download RDF
DBGET integrated database retrieval system