KEGG   Alpha proteobacterium HIMB59: HIMB59_00004900
Entry
HIMB59_00004900   CDS       T02249                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
apc  Alpha proteobacterium HIMB59
Pathway
apc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:apc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HIMB59_00004900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apc03400]
    HIMB59_00004900
Enzymes [BR:apc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     HIMB59_00004900
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HIMB59_00004900
DNA repair and recombination proteins [BR:apc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HIMB59_00004900
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH DUF835 NFACT_N Cyclin_C_2
Other DBs
NCBI-ProteinID: AFS48690
UniProt: J9Z0D8
Position
441307..442125
AA seq 272 aa
MPELPEVETTIRYLDSKVNGKKILSITTSKKKLRKNLHTTNLSVIEGSAIKSVDRRAKYI
VLTLKPLKYLVIHLGMSGRLKFFHKKNYTNEKHDHVVMEFSQFNVVFNDPRRFGMFFMLE
DDQELHNFFQHYGVDLLLDSINYENIYLIFQKKNVSLKQILLDQRVFVGIGNIYANEALF
HSRLHPERKSNTLSKAEIKQLIRSCRHVLELSLKNGGSSINDYKSPDGTLGSFQNMFQVY
QRTEVILKKKRYPVKKIVQNGRSTFFSPTLQK
NT seq 819 nt   +upstreamnt  +downstreamnt
atgcctgagctacccgaagtagaaactacaataagatatttagattcaaaagttaatgga
aaaaaaattttatccattacaacatctaaaaaaaaactacgtaaaaacttacatacaaca
aacctttcagttattgaaggaagtgctattaaatctgttgatcgaagagcaaaatatatt
gttcttactttaaaacctcttaagtatttagtgattcatttgggaatgagtggtcgatta
aaattttttcataaaaaaaattatactaatgaaaaacatgatcatgttgtcatggaattt
tctcaattcaatgttgtctttaatgaccctagacgttttggaatgttttttatgttagaa
gatgatcaagagcttcataatttttttcaacattacggagtagatctattgctcgactcc
attaactatgaaaatatttatcttatatttcaaaaaaagaatgtttctttgaaacaaata
cttttagatcaacgagtctttgtaggcattggcaatatttatgctaatgaggctttattt
catagccgacttcacccagagcgtaagtccaatacgttgagtaaagctgaaatcaaacaa
ttaattcgctcttgtcgtcatgttttagaactttctttaaaaaatggaggctcatccatt
aatgattataaatcccctgatggaactttgggtagttttcaaaatatgttccaggtctat
cagcgaacagaagttatcttgaagaaaaagcgctacccagtaaaaaaaatagtacaaaat
ggacgttcaacttttttttctccgactttacaaaaataa

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