KEGG   Alpha proteobacterium HIMB59: HIMB59_00007410
Entry
HIMB59_00007410   CDS       T02249                                 
Name
(GenBank) pseudouridine synthase family protein
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
apc  Alpha proteobacterium HIMB59
Brite
KEGG Orthology (KO) [BR:apc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:apc03009]
    HIMB59_00007410
Enzymes [BR:apc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     HIMB59_00007410
Ribosome biogenesis [BR:apc03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HIMB59_00007410
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF6501
Other DBs
NCBI-ProteinID: AFS48938
UniProt: J9YZD3
Position
complement(683596..684282)
AA seq 228 aa
MSKKTFSKLLSEKFQISRKKAEDLIKNKKVLLNDNIESRPYLVVQEKDIISLNKPIEKKV
NLLLFHKPKGCITSRSDEKNRTIVYDYLPKKFKNYHYIGRLDYNSEGLLLLTDSTTYKRK
LESPKSNIKRVYVVNVIGSFNDLKLKALNKKIYAAKIYKNPHVSLTHTDKNKHTLRFELT
EGKNREIRNICEIFNLKVERLKRISFGQYKVKTIPISKYKEMTIHESY
NT seq 687 nt   +upstreamnt  +downstreamnt
atgtcaaaaaaaacatttagtaaattactttctgaaaagtttcaaatttctcgaaaaaaa
gcagaggacttgattaaaaacaaaaaagttttattaaatgataatattgaatcaaggcca
tatttagtagtacaagaaaaagatatcattagtctcaataagccaattgaaaaaaaagta
aatcttcttttatttcataagcctaaagggtgtattacctcaaggagtgatgaaaaaaat
aggacaattgtttatgattaccttccaaaaaaatttaaaaattatcattatattggtaga
ttagattataattcagagggattgttattattaactgatagcactacctataaaagaaaa
ctggagtctcctaaatcaaatatcaaaagagtctatgtggtaaacgttattggatctttt
aatgatttaaagcttaaagctctgaataaaaaaatttatgcagcaaaaatatataaaaat
ccccatgtatctttaactcatacagataaaaataagcatacgcttaggtttgaattaaca
gagggaaaaaatagagaaattagaaatatatgtgagatatttaatttaaaagtggagaga
ttaaaaagaatttcttttggtcaatacaaagtgaaaactatcccgatatctaaatataaa
gaaatgacaatacatgagagttattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (71)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (83)   

Download RDF
DBGET integrated database retrieval system