KEGG T00023: APE

Aeropyrum pernix: APE_1094.1

Entry

APE_1094.1 CDS T00023

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

ape Aeropyrum pernix

Pathway

ape03030	DNA replication
ape03410	Base excision repair
ape03420	Nucleotide excision repair
ape03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:ape03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:ape03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ape03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ape03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C FlpD

Other DBs

NCBI-GI:

118431328

NCBI-GeneID:

1445787

UniProt:

Q9YD18

Position

complement(693527..695335)

AA seq 602 aa
MPFKPVAEAFASMERITSRTQLTLLLTRLFKSTPPGAIGIVVYLIQGKLGPDWKGLPELG
VGEKLLVKAIALAYKATEERVERLYKSVGDLGSVAERLSREYRSRAARAVTLEAFMAGGG
EALTVRRVYNTLYRIAMAQGEGSRDIKLRLLAGLLADAEPVEAKYIVRFVEGRLRVGVGD
ATVLDALAMAFGGGAHARPVIERAYNLRADLGYIAEVVAREGVDALRGVKPQVGVPIRPM
LAERGRDPAEILRKVGGRAVVEYKYDGERAQIHKKDGEVYIYSRRLENITRMFPDVVEMA
RKGLKAGEAIVEGEIVAVDPDNYEIQPFQVLMQRKRKHDIHRVMREVPVAVFLFDALYVD
GEDLTSKPLPERRRRLKEIVVETPLWRLAESIETSDPEELWTFFLKAIEEGAEGVMVKAV
HRDSVYTAGVRGWLWVKLKRDYKSEMMDTVDLVVVGAFYGRGKRGGKLSSLLMAAYDPDR
DVFPTVCKVATGFTDEELDRMNEMLKKHIIPRKHPRVESRIEPDVWVEPALVAEILGAEL
TLSPMHTCCLNTVRPGVGISIRFPRFIRWRDDKSPEDATTTHELLEMYKRQLRRVEEPAE
QV

NT seq 1809 nt +upstreamnt +downstreamnt
atgcctttcaagcccgtggctgaggccttcgcctccatggagaggataacctctaggacg
cagctcaccctcctcctcacaaggctcttcaagtccacgcccccgggggcgatcggtatt
gtggtgtacctgatccaggggaagctggggcccgactggaaggggctgccggagctgggt
gtcggggagaagctgcttgtaaaggccatagccctggcttacaaggccactgaggagagg
gttgagaggctctacaagtctgtaggcgacctggggagtgtggccgagaggctgtcgcgg
gagtaccgctcccgggctgccagggccgtcaccctggaggcgttcatggcgggagggggg
gaggcgctgactgtgaggagggtttacaacacgctgtacaggatagccatggcgcagggt
gaggggagcagggacatcaagcttaggctgctggccggcctcctggcggacgccgagccc
gtggaggcgaagtatattgtgaggtttgtggaggggaggctgagggtgggtgttggggac
gcgaccgtcctcgacgccctcgccatggccttcggcggcggggcccacgcgaggcccgtt
atagagagggcctacaacctcagggccgacctaggctacatagcggaggtcgtggccagg
gagggtgttgatgcgctgaggggtgtgaagccccaggtcggcgttcctataaggccgatg
ctggccgagagggggagggacccggctgagatactcaggaaggtggggggcagggctgtc
gtcgagtataagtacgatggggagagggcgcagatacacaagaaggacggggaggtctac
atctactcgaggaggcttgagaacataaccaggatgttccccgacgtggttgagatggcg
aggaagggcctcaaagccggggaggctatagtcgagggggagatagtggccgtagaccca
gacaactatgagatacagcccttccaggtcctcatgcagaggaagaggaagcacgacata
cacagggtcatgagggaggtgcccgtcgccgtcttcctcttcgacgccctctacgtggac
ggcgaggacctcacaagcaaacccctccccgagaggcgcaggaggctcaaggagatagtt
gtggagacgcccctctggaggctggcggagtccatcgagaccagcgaccccgaggagctg
tggaccttcttcctgaaggccatagaggagggggccgagggcgtcatggtcaaggccgtc
cacagggactcagtctacaccgcgggcgtaagggggtggctgtgggtcaagctgaagagg
gattacaagagcgagatgatggacacggtggacctcgtagtggtgggcgccttctacggc
agggggaagaggggcgggaagctcagcagcctgctcatggccgcctacgacccagacagg
gacgtgttccccaccgtctgcaaggtggccacagggttcacggacgaggagctggacagg
atgaacgagatgctgaagaagcacatcatacccaggaagcacccgagggtagagtcgagg
atagagcctgacgtgtgggtggagcccgccctcgtggcggagatactgggcgccgagctc
accctctcaccaatgcacacctgctgcctcaacactgtgaggccgggggtggggataagc
ataaggttccccaggttcataaggtggagggacgacaagagtccggaggacgcgacaaca
acccacgagctgctcgagatgtacaagaggcagttgaggagggttgaagagccggcggag
caggtgtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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