KEGG A.pernix: APE

Aeropyrum pernix: APE_1794

Entry

APE_1794 CDS A.pernix

Gene name topA

Definition DNA topoisomerase I (EC:5.99.1.2)

Orthology K03168 DNA topoisomerase I [EC:5.99.1.2]

Class Genetic Information Processing; Replication and Repair; DNA
replication proteins
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: Topoisom_bac Toprim
PROSITE: TOPOISOMERASE_I_PROK

Other DBs NCBI-GI: 14601630
NCBI-GeneID: 1446244
NITE: APE_1794
UniProt: Q9YB01

Position 1129033..1131054

AA seq 673 aa
MVAEKPKAAAKIAYALSDGRGVLRCSEYGVPYWIVRRDGAAIVVAPSAGHLFGPHTDSRG
FPVFDFEWRPIFEFDRGAGYLSKFYRMLSRILPGASLYVNACDYDIEGSVIGFKIIEAFG
DVNRARRMKFSTLAPQDIRRAYARMERLDVEMIEAGMARSEMDWLWGINVSRALMEAARR
AAGRRVILSAGRVQSPTLVEAYRRWREINLHVPKASVAVKITAEKGGGVFDARPHGWKPQ
SLETARSIKSELRKNPWLAVEEVRSERSILRPPPAFNLGDLQKEANRILGLPPLRTQSIA
EELYLEALISYPRTNSQKLPPSINYRAILDKLAHGPLGREARELLKETGGVLRPVQGSKD
DPAHPAIHPTGEKPSQRLSKEHMAVYELIVRRFLAAFSREAIVSKSSVLLRDFQGRVWRA
EGLRVEDLGWLKYYHYSTPGEKPMPPLDRGDKARVVRVDVRVEWSQTPVRLDKASLLRWM
ESVNIGTEGTRARIIETLYKRGYLEGSRKSEVTPLGEAVAVIIQTLFPELSKPDLTRRFE
SMIEDIRSGRRTRQEVIDMSKKTISKLLESFLDRLDTAVREIGVSLGSVEVEAACHLCGR
KAVSAVSGYRLCSHHMEAFDRLRKALPNLASTISSTPREALEAIARGRSRAGAWVRDVAA
LALRDDGLYKALL

NT seq 2022 nt +upstreamnt +downstreamnt
gtggttgctgagaagcctaaggcggctgctaagatagcctatgccctgtcagacggccgg
ggtgtcctgaggtgtagcgagtacggagtaccctactggatagtccgcagggatggagcc
gccatagtagtcgctccctcagcgggccacctcttcggcccccacacagactctaggggc
ttccccgtgttcgacttcgagtggcgccctatcttcgagttcgacaggggagcggggtac
ctctccaagttctaccgcatgctttcaagaatactgcccggcgctagcctctacgttaac
gcctgcgactacgacatcgagggcagcgttataggtttcaaaataatagaggccttcgga
gacgtaaacagggctaggaggatgaagttctcgacactagccccgcaggacattaggagg
gcctacgccaggatggaaaggctggatgtcgagatgatagaggcgggtatggctaggagc
gagatggactggctctggggtatcaacgtgtcgagggccctcatggaagctgccaggagg
gcggcgggcaggagggtcatacttagcgccgggagggtgcagagccccactcttgtagag
gcctacaggaggtggagggagataaacctccacgtccccaaggcttctgtcgcggtgaag
ataaccgccgagaagggtggaggcgttttcgacgccaggccgcacggctggaagccccaa
tccctcgagacagccagatctataaagagcgagctcaggaaaaacccctggctagccgtg
gaggaggttaggagtgagaggagcatcctgaggccccctcccgcgtttaacctgggcgac
ctgcagaaggaggctaataggatactgggtctgccgcccctcaggacgcaaagcatagct
gaggagctctacctggaagccctcataagctatccacgcaccaacagccagaagctccct
ccctccataaactacagggccatactggacaagctggcccatggacctctaggcagggag
gcgagggagcttctgaaggagacgggaggcgtgctgaggcctgtccagggatctaaagac
gacccagcccacccggcgatacacccgacgggtgagaagcctagccagcgcctctctaag
gagcatatggctgtttacgagctcatagttcggaggttcctggcagcgttcagcagggaa
gcaatagttagcaagtcgtcagtgctgctgagagacttccaggggagggtctggagggct
gagggtctgagggttgaggacctcggctggctcaagtactaccactacagcacgccgggc
gagaagcctatgccccctctagacaggggtgataaggctagggttgtcagggtcgatgtc
agggtggagtggagccagacgccggtgaggctggacaaggcaagcctgctcagatggatg
gaaagtgtaaacataggtactgagggcacaagagctaggattattgagactctctacaag
agaggctatcttgaggggtctaggaagtccgaagtgacacccctaggggaagcagtggcc
gtcataatccagaccctattcccagagctctccaagccggacctaaccaggaggttcgaa
tccatgatcgaagacatccgcagcggccgtagaaccaggcaggaggtcatagatatgtcg
aagaaaacaatctcgaaactcctggagagcttcctagacaggctcgacaccgccgtcagg
gagataggcgtctccctaggcagcgtagaggtggaggccgcctgccacctatgcggtagg
aaggctgtttcggcggtaagtggctacagactctgcagccaccatatggaggcgttcgat
aggcttagaaaggccctacctaatcttgcctcgacaatatcctcgacccctagggaggcc
ctggaggccatagccaggggcaggtccagggcgggggcctgggtgagagatgtggcggcc
ctggcgctgagagacgacgggctgtacaaagccctattgtga

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   NITE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (2)   
   PROSITE (1)   
All databases (14)

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