KEGG T01076: 100160821

Acyrthosiphon pisum (pea aphid): 100160821

Entry

100160821 CDS T01076

Definition

general transcription factor IIH subunit 4-like

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

api Acyrthosiphon pisum (pea aphid)

Pathway

api03022	Basal transcription factors
api03420	Nucleotide excision repair

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:api03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:api03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3

Other DBs

NCBI-GI:

NCBI-GeneID:

APHIDBASE:

UniProt:

Position

AA seq 471 aa
MSKEPSTSKEKRKNLRKDDGSKILKVLTLYEYLIKLPEAVQDRLYSHPPTCLTVFRVLPD
ITQQFTLRILFIEQPVPQSVLSSWVPANYSRELDESIEVATNLHIWKLTSVSGGLKGWIL
NSTFKKKLKVALMGGGRSTVPNSDMTADPKARDIDFLDSYAYERWECILHYMVGSKHEGI
SSDAVRVLLNAGLMVRDTDDSPVITSTGFQFLLLDMATQVWYFMLRYMETVESRGLDLAQ
CLTFLFQIHLGTLGWDYITDEMSENLQAFLQHLREFGLVYQRKRKAGRFYPTRLVIEMGQ
GNSRTSERMKNKERYIVVETNFRIYAMTDSDLKVALVALFTHMLYRFPNMSAGILTRDSV
RTALRSGITAAQIVRFLTVHTHPQMQECGMPQTVIDQIYLWENERNRLTYTDGVLYSNIN
TPNDYETIKNYAADIGALVWCDERRRNIVVSTDGHDDVRKFWKKQPKSDPF

NT seq 1416 nt +upstreamnt +downstreamnt
atgtcaaaagaacccagcactagcaaggagaaacggaagaatttgcgtaaagacgacggt
tctaaaatactgaaagtcctgacattatatgaatacctcatcaaacttccagaagccgtt
caagatcggctatacagtcatccaccgacttgcctaacagtgtttagagtgttacctgac
attacgcagcagttcactttacgtatattattcatcgaacagccagtaccgcaatcagtt
ctttcatcctgggtaccggctaattattcccgtgaacttgacgaatctatagaggtagcc
accaatttacacatatggaaattaaccagtgtatctggcggcctcaagggatggattcta
aattctacgttcaagaagaaactcaaagtggcccttatgggaggtggccgttctacggta
cccaacagcgatatgacggctgatccaaaagcaagagatatagactttttagattcatat
gcgtatgaacggtgggaatgcatattacattatatggttggttctaaacatgaaggtata
tcatcagatgcagtcagagtgttactaaatgcaggtcttatggtcagagacacggatgat
agtccagttattacatcgacgggatttcagtttctactgctggatatggccactcaagta
tggtattttatgctccgctatatggaaacagttgaatcgaggggtcttgatcttgctcaa
tgtctgacattcttgttccaaatacatcttggtactttaggatgggattatataacagat
gaaatgtctgaaaaccttcaagcgtttttacaacatcttcgagaatttggattagtttac
caaaggaaacgtaaagctggacgtttttatcctactcgattagtaattgaaatggggcaa
ggaaatagccgtacttcagaacgaatgaaaaataaagaacgttatattgttgtagaaacc
aattttcggatttatgctatgactgattctgatctaaaagttgccttagttgcattattt
actcatatgctatacagatttccaaacatgtccgctggtatactaacaagagattcagtt
cgaacagcattacgtagtggcattactgctgcacaaatagtgagatttcttactgttcat
acacatccacaaatgcaagagtgtgggatgccacaaactgtaattgatcaaatttatctg
tgggaaaatgaaagaaatcgactaacatacacagatggtgtgttatatagcaatataaat
acacctaatgattatgaaacaataaaaaattatgctgctgatattggggcattggtgtgg
tgtgatgaaagaagaagaaacattgttgtaagcactgatggacacgatgacgtaagaaag
ttttggaaaaaacaaccaaaatctgatccattttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   APHIDBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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