KEGG   Acetobacter pasteurianus 386B: APA386B_577
Entry
APA386B_577       CDS       T02786                                 
Symbol
rumA
Name
(GenBank) ribosomal RNA large subunit 23S/tRNA (uracil-5-)methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
apk  Acetobacter pasteurianus 386B
Brite
KEGG Orthology (KO) [BR:apk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:apk03009]
    APA386B_577 (rumA)
Enzymes [BR:apk01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     APA386B_577 (rumA)
Ribosome biogenesis [BR:apk03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    APA386B_577 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr
Other DBs
NCBI-ProteinID: CCT58692
UniProt: S6CXL4
Position
586660..587958
AA seq 432 aa
MTETYDTDVLYLATQGDGAVRTPDGRMAYIPETLAGEHIRLTKDSEGKWQLAEVLQPSPD
RQIPPCSLFEHCGGCTLQHVKPAAILQWKVATVQHALQKAGFSNLPAFSAKQVQPHSRRR
ADLAVRRQPDGIMIGLHARNSHEVTDLTTCVVLHPDILAALPAFRATLRSLNAIRREANL
HINLLDSGLDVLLQTDGPLTAPDRVRLAQLATEQHIPRISWQQIKDTGLPEVAAQSGSVV
QTIASHQIAPPAGTFFQATRESEQYIQEAVVKSLPTKLNRRDIITELYAGCGTLTFPLAE
HARVNAYEGYAPALEALKKATGGTRISPFCRDLNHQPVLAKEIAASAVVVLDPPHAGAKL
QMRQIAQGLPNHIVYVSCNPAALAQDASLLAKAGYTVENVTVIDQFLWSAEIEAVCSFKR
ESSRRSRNGLSR
NT seq 1299 nt   +upstreamnt  +downstreamnt
gtgactgaaacctacgatacggacgttctttatctggcaacgcagggcgatggtgccgtg
cgtacgccagatgggcgcatggcctacattccagaaacccttgctggtgagcatatccgt
ctgacgaaagattcagagggaaaatggcagcttgctgaagtgcttcagccttcaccagac
cggcaaataccgccctgttctctgttcgaacactgtggtggttgtacccttcaacatgta
aagcccgctgctattttgcagtggaaagtggctaccgttcaacacgctttgcaaaaggct
ggttttagtaaccttccggcattttctgccaagcaggtacagccgcattcacgccgcaga
gccgatctggcagtaagacgccagcctgatggcattatgattgggcttcatgcacgcaac
agccatgaggttacagatcttactacctgcgttgtgctgcaccccgatattctggctgcc
ttgcccgcttttcgggccacactccgcagcttaaatgccattcgacgtgaagccaatttg
catatcaatctgctggattccgggctggatgttctgctgcaaacagatggaccactgacc
gcgccagatcgcgtccgtttagcgcaattagctacagaacagcatattccgcgcataagc
tggcagcagatcaaagatacagggttgccggaagttgctgcacaatcgggctctgttgtt
cagacaatcgcttcccaccaaattgcgccgccagccggaactttttttcaggcaacgcgt
gagagcgaacaatatattcaggaagccgttgtcaaaagcctgccaaccaagctgaaccgt
cgggatattatcaccgagctttatgctggttgtggcacccttacctttccattggcagaa
catgcccgcgtaaatgcttacgaaggttatgctcctgccctagaggctctaaaaaaggcg
actggcggcacacgtatcagcccattctgccgagatctgaaccatcagcctgttctggcc
aaggaaatagcagcttctgctgtggttgtgctggatcccccacatgcaggggcaaagctg
caaatgcgccagattgcgcaagggttaccgaatcacattgtttatgtaagctgtaacccg
gcagccttggcgcaggatgcaagcctgctggccaaagccggatatacggtggaaaatgta
accgtaattgaccagtttttatggtctgcagaaattgaagctgtttgcagctttaaacgt
gaaagctctcgccgcagccgcaacggcctttctcgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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