KEGG   Acetobacter pasteurianus 386B: APA386B_994
Entry
APA386B_994       CDS       T02786                                 
Symbol
recJ
Name
(GenBank) putative single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
apk  Acetobacter pasteurianus 386B
Pathway
apk03410  Base excision repair
apk03430  Mismatch repair
apk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:apk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    APA386B_994 (recJ)
   03430 Mismatch repair
    APA386B_994 (recJ)
   03440 Homologous recombination
    APA386B_994 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apk03400]
    APA386B_994 (recJ)
DNA repair and recombination proteins [BR:apk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     APA386B_994 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     APA386B_994 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      APA386B_994 (recJ)
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH CDC45
Other DBs
NCBI-ProteinID: CCT59095
UniProt: S6D681
Position
1041909..1043741
AA seq 610 aa
MQSSTLQLTEHSEEASSPAVLGVEASLIGRRWAWRAGAEDPALMRLGAALAQQLGIPEIV
GRLLAMRQITPDQAPHFLEPKLRALMPDPSSLTDMDKAAERMAKAVQNREVIGIFGDYDV
DGACASAILASFFEELGCTVHTHIPDRMTEGYGPNVAALDNLVAQGASILICVDCGTASA
DILSQVTDKADVIVLDHHKSEDALPPILATVNPNRPDCSSGLHHICAAALAFLAAVATTR
DLRRADWFTADQPPPDLMHQLDLVALATVCDVMPLHGLNRAFVTQGLKIMARRQRTGLNA
LMEIAGVTKAPDAFSCGFALGPRINAGGRIAEAALGLRLLRCPDSFEARQMAERLDAVNR
RRQGVEADILDRAMQQAEAQKEAGHAVILLAGKDWHPGVVGIVAGRIKERFNRPALVGAE
QEDGTIKGSGRSVPGLDLGTVIIAARQAGMLKTGGGHAMAAGFSLTADKLEDFHTFLDTR
LAQAATLPEKVPLTIDAVVAISGATAELAQDMRALAPFGAGNPEPLLAIPRVTVIRADRI
GRDGNTLRLLLKGENNGRLKALLFRAHENPLAAKLEDTTRPALHLAGYLRAESWNGRTDA
TFFIQDAAAA
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgcaaagcagcaccttgcaacttaccgaacactctgaagaagcttcctcccctgctgta
ttgggggtggaagccagcttgattgggcggcgttgggcttggcgtgccggagcagaagat
cctgctctgatgcgtctgggggctgctttggcccaacaactgggtattccagaaattgtt
ggccgtctgctggccatgcgtcagatcacaccagatcaggcccctcattttctagagccc
aagttgcgggcacttatgcctgatccttccagtctcacggatatggataaagctgctgag
cgcatggcaaaagctgtccagaaccgtgaagtaattggtatttttggtgattatgacgtg
gatggtgcctgcgcctccgccattcttgcctctttttttgaagaactcggctgcaccgtt
catacccatatcccggatagaatgaccgaaggatatggccctaacgtagccgcgctggat
aatttggtggcgcaaggcgcttccatattgatttgtgtagattgcggtacagcttcggca
gatattctgtctcaagttacagacaaagccgatgtgattgtgctggaccatcacaaatcg
gaagatgcccttccccctattctggcaacagttaaccctaaccggcctgactgttcctct
ggcttgcaccatatctgtgccgcagccctcgcctttcttgccgcagttgccactacgcga
gacctaaggcgtgcagactggtttacagcagaccaacctccgcccgatcttatgcaccag
cttgatctggtggccttggcaacggtttgtgatgttatgcccctgcatgggcttaaccgc
gcctttgtaacgcaagggcttaaaattatggcccgccgccaacgcactggcctgaatgcc
cttatggaaattgctggcgttaccaaagctccagatgctttttcctgcggttttgcatta
gggccacgcatcaatgcaggtggccgtattgcagaagcagctttaggcctacgcctgctc
cgttgcccagatagctttgaagcccgccagatggccgaacgtctggatgctgtaaaccgc
cgcagacaaggtgtagaggccgatattctggaccgcgccatgcaacaggctgaagcccag
aaagaagctgggcacgctgttattttgctggccggaaaagattggcacccaggtgttgtg
ggtattgtagcggggcgtattaaggaacgcttcaatcgaccagcccttgttggagccgaa
caggaagatggcaccattaaaggttctggccgttctgttcccgggttagatcttggcacc
gtaattattgctgctcgtcaagctggaatgctgaaaacaggcggtggccacgccatggct
gctggcttctcccttaccgctgataagctggaagattttcatacctttcttgatactcgg
ttagcacaggcggctacacttccagaaaaagtgcctcttaccatagatgcggtggtagcc
atttctggcgccacagcagaactggcgcaggatatgagggcccttgccccatttggtgcc
ggaaacccggagcctctgttagctataccccgtgtaacagttatacgggcagaccgcatt
ggccgagacggcaacacgctgcgcctgcttttaaagggtgaaaataatggccggttgaaa
gcgctgctgttccgcgcgcatgaaaaccctttagcggccaaactggaagacacaacacgc
cctgccctacatcttgccgggtatctgcgggcagaaagctggaatggcagaacagacgcc
actttctttattcaggacgctgcggctgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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