KEGG   Anas platyrhynchos (mallard): 101799010
Entry
101799010         CDS       T02816                                 
Symbol
DHX30
Name
(RefSeq) ATP-dependent RNA helicase DHX30 isoform X1
  KO
K13185  ATP-dependent RNA helicase DHX30 [EC:3.6.4.13]
Organism
apla  Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:apla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:apla03041]
    101799010 (DHX30)
   03029 Mitochondrial biogenesis [BR:apla03029]
    101799010 (DHX30)
Enzymes [BR:apla01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     101799010 (DHX30)
Spliceosome [BR:apla03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    101799010 (DHX30)
Mitochondrial biogenesis [BR:apla03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    101799010 (DHX30)
SSDB
Motif
Pfam: Helicase_C DEAD HA2_C dsrm OB_NTP_bind Dicer_dimer nSTAND3 AAA_19 HA2_N AAA_22 AAA_16
Other DBs
NCBI-GeneID: 101799010
NCBI-ProteinID: XP_027308705
Ensembl: ENSAPLG00000015682
EnsemblRapid: ENSAPLG00030015314
Position
2:163605126..163637535
AA seq 1237 aa
MAALGLLLQAAAGCGSAGPLRLCRRYRGARGLCSRLPAPESTEEARQEEEEEPQPAATAA
AGGEGQDGGAAMGMDSRDLLKEFPQPKNLLNSVIGRALGISHARDKLVYIHTNGPRKKKV
TLHIKWPKNVEVEGYGTKKIDAERQAAAAACQLFKGWGLLGPRNELFDAAKYRLLADQLG
CPDERWCSEGKWRSKSGPSLADLSTCWRRMEPDDTIQPMEQGRMPKAMRREELEEGELEE
GELEEGELEEEAIDVSDYLPMAHQDARTSGRDASRGGSSIEMTDDNTAIRALTQFPLPKN
LLAQVIQIATSSSTVKEYMQFRTVGTKTKICKLTLRWPCPMTFAAKGRRKVEAENKAAAL
ACQKLKSLGLVDKNNNPLSHAMYNMTSLRELGENQRKPCHIKVPEATLRKIENYLNHYPV
DIRESRPRIADDMMNLSKESGAISDAITGKTYIPMLEAEEVRLSQNLLALWKRRGSSWQE
SHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQ
PRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSL
EGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVK
VPGFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGI
LCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLAT
NIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFA
YHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPDIKAVDEA
VILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLTRDPF
SSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRDSRARDNYLQDYYLYGPS
LRFINGLVKQFSENLYEAFLVSSPSDCTMPSSVCNQYSEEEELVKGVLMAGLYPNLIQVR
QGKVTRQGKFKPNSYAYRTKAGTVLLHKSTINREASKLYSRWLTYFMAVKSNGGVFVRDS
SQVHPLAVLLMTDTDIHVRDDGWRATVSLTDSDLLVLEGDSYTIRLLRDFRVSLSKMVET
CLCYEMAAIPGDLHHQHSQLLDILVDLLKGPPGSFGA
NT seq 3714 nt   +upstreamnt  +downstreamnt
atggcggcgctggggctgctgcttcaggcggcggcgggctgcggctcggcggggccgctc
cgcctctgccgccgttaccggggggctcgggggctctgcagccgcctgccggcgcccgag
agcaccgaggaagcccggcaggaggaggaggaggagccgcaaccagcagcaacagcagcg
gcgggcggtgaggggcaggacggcggcgccgccatggggatggattccagagacttgttg
aaggaatttccacagcctaaaaacttgctcaacagcgtgattggaagagccctgggcatt
tctcatgcaagggacaaactggtatacatccacacgaatgggccgagaaaaaagaaagtc
actctgcatataaagtggcctaaaaacgtggaagtggaaggctatgggaccaagaagatt
gatgctgagaggcaggcagcagcagctgcatgccagctcttcaagggctggggtttgctg
gggcccagaaatgagctgtttgatgccgcaaagtaccggctcctcgcagaccagcttggc
tgccccgatgagaggtggtgctcggagggcaagtggcgctccaagtccggaccttctctc
gctgacttgtccacctgctggcggcgcatggagccggacgacaccatccagcccatggag
cagggccgcatgcctaaagcgatgcggagagaagagctggaggaaggggagctggaggag
ggagagctggaggaaggggagctggaggaagaagcgatcgatgtttccgattatttacct
atggcgcatcaagatgctcgaacctcaggcagagatgcgagccgaggagggagttccatc
gagatgacagacgacaacactgccatccgagctctgacgcagttcccacttcccaaaaat
ctcctggcccaagtgattcagatcgccacctcttcctccacagtcaaggaatacatgcag
ttccgcacagtaggtaccaagaccaagatctgcaagctcacgctccgctggccctgtccc
atgacttttgctgccaagggccgtcgcaaggtggaagcagaaaacaaagcagcggcgttg
gcctgtcagaagcttaagagccttggcttagtggacaagaacaacaaccctctcagccac
gccatgtacaacatgacctcgctccgggaacttggtgagaaccagaggaaaccctgccac
atcaaagttcctgaagccaccctgcgcaagattgagaactacctgaatcattacccagtg
gacatcagggaatccaggccccggattgctgatgacatgatgaacctgagcaaggaatcg
ggtgcgatcagcgatgccatcacggggaagacctacatccccatgctggaggcggaggag
gtgcgccttagccagaacctgctggccctctggaaaaggagaggatcctcgtggcaggag
agccacccgctgccggtggatcctcacaaggacaccatcctctcggccatcgagcagaac
cccgtggtcgtgatagcaggagacacgggctgcgggaaaaccacgcgcatccctcagctc
ctgctggaacactacatcctggaggggcgcggcgcccgctgcaacgtggtcatcacccag
cccaggaggatcagcgccatctcggtggcccagcgcgtggcgcaggagctagggcccaac
atgaggaagaacgtgggctaccaggtgcgactggagagcaagccccccgcccggggggga
gccctgctcttctgcaccgtgggcatcctgctgcgcaagctgcaggggaaccccagcctg
gagggcgtcagccacgtggtggtcgacgaggtccacgagcgagacgtcaacacggatttc
ctgctcatcctgctgaagggcatccagaagctcaaccccgacctgcgcctggtcttgatg
agcgccacgggagacaatcagcgtttctcgcattatttcggggattgccccgtggtcaag
gtgccgggcttcatgtacccggtgaaggagtactatctcgaagagatcctggccaagctt
ggaaggcaccgacaccggcactacgagataaagcaatcagatgatgaatgcgtccttgac
ctcgatctgatcaccgatctcgtactccagattgacgcccacggagaaccaggtgggatc
ctctgcttcctccctggctggcaggaaatcaagggagtgcagcagcgcctgctggagatg
ctggggtctcagaacagccggtacctcgtcttaccagtgcactctaacatccccatgatg
gaccagcaaaacatcttccagcggcctccccccggcgtcaggaagatcgtcctggccacc
aacatcgccgagacctccatcaccatcaacgacatcgtccacgtggtggacagcggcacg
cacaaggaggagcgctacgacctaaagaccaaggtgtcttgcctggagacagtgtgggtg
tccaagtcgaacgtcgtgcagaggcgagggcgtgctggccgctgccagtcaggatttgcc
tatcacctcttccctcgcagccgcctggacaagatgccaacttaccaggttccagagatc
ctacgcaccccactggagaacctggtggttcaggccaagatccacatgccagaaaaaaca
gcggttgaatttctgtccaaggctctggacagccctgacatcaaagctgtggatgaagca
gtgatcttgctgcaggagatcggagtgctggaccagcgagaagccctcaccacgctgggc
aaacgcctggcccagatctccacggatccccggctggccaaggcaatcgtcctggcctcc
atctaccgctgcctccaccccctgctcgtcatcgtgtcctgcctcacccgggaccccttc
agcagcagcctgcaaaaccgtgcggaggtggacaaggccaaggctgttctgagccgggag
agcgggagcgatcacctcgcctttgtcagagctgtggcgggctgggaggaggtgctgagg
cgcagagacagccgtgccagggataactacctgcaggactactacctgtacggccccagc
cttcgcttcatcaacggccttgtcaagcagttctcggagaacctctacgaagccttcctg
gtgtcgtccccgtctgactgcaccatgccctcctccgtatgtaaccagtacagcgaggag
gaggaactggtcaagggagtgctcatggctgggctctaccccaacctcatccaggtgaga
caaggcaaagtgacccgccaagggaagttcaaacccaacagctacgcctaccggacaaag
gcgggcaccgtgctgctccacaagtcaacgatcaacagggaggcctccaagctgtacagc
cgctggctaacgtacttcatggccgtgaagtccaacggcggcgtgtttgtgcgggactcc
tcgcaggtccacccgctggctgtgctgctcatgaccgacacagacatccacgtccgagat
gatggctggcgagcaacagtctccctgacagacagcgacctcctggtgctggagggagac
tcctacaccatccgcctcctgcgtgatttccgcgtgtcgctctccaagatggtggagacg
tgcctgtgctatgagatggcagccatccccggggacctgcaccaccagcacagccagctg
ctcgacatcctggtggatctgctcaaaggccctcctggcagctttggcgcttag

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