KEGG   Anas platyrhynchos (mallard): 101801532
Entry
101801532         CDS       T02816                                 
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla00900  Terpenoid backbone biosynthesis
apla01100  Metabolic pathways
Module
apla_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:apla00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    101801532 (GGPS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:apla01006]
    101801532 (GGPS1)
Enzymes [BR:apla01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     101801532 (GGPS1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     101801532 (GGPS1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     101801532 (GGPS1)
Prenyltransferases [BR:apla01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   101801532 (GGPS1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 101801532
NCBI-ProteinID: XP_027309559
Ensembl: ENSAPLG00000005831
EnsemblRapid: ENSAPLG00030008599
Position
3:25354007..25379000
AA seq 299 aa
MDGNDETSKRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASL
LVDDIEDNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLE
LHKGQGLDIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKEDLKPLLNTLG
LFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSKPESTQVQNILRQRTENI
DIKKYCVHYLENVGSFEYTRNTLKELESEAYKQIESLGGNPELVALVEQLSKMFKETEN
NT seq 900 nt   +upstreamnt  +downstreamnt
atggatgggaacgatgaaacatctaaaagaatcctagagccataccagtatttacttcaa
ctaccaggtaagcaagtgagaaccaaactgtcgcaggcctttaatcactggctgaatgtt
ccagaagataagatacaggttatcattgaagtgacggagatgttgcacaatgcaagcctg
cttgtggatgatattgaagataactcaaagctacggcggggctttccagtggctcacagt
atctatggaattccatcagtaatcaactgtgctaattatgtgtatttccttggcttagag
aaggttttaacccttgatcacccagatgctgttaaagtttttacccgtcagctgctggaa
ctccataaaggtcaaggcctggatatttactggagggatacttacacctgtcctacagaa
gctgaatacaaagctatggtgctacaaaagacaggtggtctctttggattggctgtaggc
ctcatgcagctcttctcaaattataaagaagacttaaaaccacttcttaacacactcggt
ctcttcttccagataagagatgactatgccaacttgcactccaaagaatatagtgaaaac
aagagtttttgtgaagacttaactgagggcaagttctcattcccaaccattcatgccatt
tggtcaaaacctgaaagtactcaggtgcaaaacattttacgccaaaggacagaaaacata
gatataaaaaaatactgtgtgcattaccttgaaaatgtgggttcatttgagtacactcga
aatacgttaaaggagcttgaatctgaagcctataaacaaattgaatcactagggggaaac
cctgagcttgtagcactagttgaacagctgagcaaaatgttcaaagaaactgaaaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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