KEGG   Acanthaster planci (crown-of-thorns starfish): 110984234
Entry
110984234         CDS       T05078                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
aplc  Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018  RNA degradation
aplc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aplc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110984234
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110984234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aplc03019]
    110984234
   03041 Spliceosome [BR:aplc03041]
    110984234
Messenger RNA biogenesis [BR:aplc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110984234
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110984234
Spliceosome [BR:aplc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110984234
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 110984234
NCBI-ProteinID: XP_022099908
UniProt: A0A8B7Z2R1
Position
Unknown
AA seq 96 aa
MASGLESYINHTVSVITNDGRQIVGTLKGFDQTINLILDESHERVYNSASGVEQVVLGLY
IIRGDNIAIIGEIDEETDSALDLSNVKAEPLNPVVH
NT seq 291 nt   +upstreamnt  +downstreamnt
atggcatcaggcttagaaagttacatcaatcacacagtatctgttattacaaatgatggt
agacaaatcgtgggaactctaaagggttttgaccagacaatcaacctcatcttagatgag
agtcatgagcgagtctataatagcgcctcaggagtggagcaagtggtgttgggactgtat
atcatcagaggtgacaacatagccatcatcggtgagattgatgaggagactgatagtgcc
ctagacttatccaatgtcaaggcagaacctcttaacccagtggtacattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG ORTHOLOGY (1)   
   RefGene (68)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (84)   

Download RDF
DBGET integrated database retrieval system