KEGG   Acanthaster planci (crown-of-thorns starfish): 110986359
Entry
110986359         CDS       T05078                                 
Name
(RefSeq) pre-mRNA-processing factor 19-like
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
aplc  Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040  Spliceosome
aplc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aplc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110986359
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110986359
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aplc03041]
    110986359
   04121 Ubiquitin system [BR:aplc04121]
    110986359
   03400 DNA repair and recombination proteins [BR:aplc03400]
    110986359
Enzymes [BR:aplc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110986359
Spliceosome [BR:aplc03041]
 Complex B
  Other components
   Prp19 complex
    110986359
 Complex C
   Prp19-CDC5 complex
    110986359
Ubiquitin system [BR:aplc04121]
 Ubiquitin ligases (E3)
  U-box type E3
   110986359
DNA repair and recombination proteins [BR:aplc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    110986359
SSDB
Motif
Pfam: WD40 Prp19 ANAPC4_WD40 NBCH_WD40 U-box zf-Nse PAS_11 Pullul_strch_C zf-RING_UBOX
Other DBs
NCBI-GeneID: 110986359
NCBI-ProteinID: XP_022103864
UniProt: A0A8B7ZDY1
Position
Unknown
AA seq 510 aa
MALVCSICHEVPEHPVLSTVSNHVFERRLIEKFIAENGVDPINGEVLSEDQLVDIKVSPL
VKPRPPTATSIPAILKLLQDEWDACMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAAPGMVPAQIAALPAGAAQGVVRHEPMEAAEPGPAAMTEDIIQ
KLQEKANLLTAERKRRGKKVPDELMPPDDIRSFRTQSSHPGLHSASVPGILSMDLQASDT
SKVLTGGADKSVVVFNKDTEQVTAVMKGHNKKVTNVIYHPTEEIVFSSSPDTTIRIWFVG
NASCQQVIRAHNAPVTGLSLHATGDYLLSCSEDQHWAFSDIASGRVLTKVTDDSIGHALT
CAQFHPDGLIFGTGTGSSIIKIWDLKEGTNVANFPGHSGPITALAFSENGYYLATAADDA
VVKLWDLRKLKNFKNITLDDRYEVKSLCFDQSGTYLAVAGTDLRVYLCKQWQELKVFSDH
TDMTTGVRFGQHTTFVSSVSMDRSLKFYGL
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggcgctcgtttgctcaatttgccacgaagtccctgagcaccctgtgttgtcaacggtg
tccaaccatgtctttgagcgtcgactcattgagaagtttatcgctgagaatggagttgat
ccaatcaatggggaggttctgtccgaggaccagcttgtagatattaaagtgagccccttg
gtcaagccgcgcccacccactgccaccagcatcccagccatcttgaagttgctgcaggat
gagtgggatgcgtgcatgctgcacagcttcaccttgcgccagcagctgcagacagcccgg
caggagctgtcccacgccctgtaccagcatgacgcggcctgccgtgtcattgccagactc
accaaagaggtcacagctgctcgtgaagctctggctaccctgaagccccaggccgcacca
ggcatggtccccgcccaaatcgctgcccttccagcaggtgctgcccagggtgtggttaga
cacgaacccatggaagctgctgagccaggaccggcagccatgacagaagacatcatacag
aagcttcaagagaaggccaacctgctgactgcagagcgtaagcgcagaggcaagaaagtt
ccggatgagctcatgccccctgatgacatcaggtccttcaggacccaatcctctcaccca
ggtttgcatagtgccagtgtaccaggtatcttgtccatggacctccaggcctcagataca
tcaaaggtgttgacaggtggtgcggacaagtcggttgttgttttcaacaaggacacagaa
caggtgacagccgtcatgaaaggtcacaacaagaaagtcaccaatgtcatttatcaccca
acagaggaaatcgtgttcagctcctctccggacacgacgatccgcatctggtttgttggt
aatgcctcctgccagcaagtcatccgtgcccacaatgctccggtcacaggtctgagcctg
cacgccacgggtgactaccttctgagttgctctgaagatcagcactgggcattctctgac
atcgcaagcggtcgcgtgctgaccaaggtcactgatgactccatcgggcatgctctgaca
tgtgcccagttccaccctgatggtctgatctttggcacaggaaccggcagcagcatcatt
aaaatctgggatttgaaagagggcaccaacgtggccaacttccccggccactcgggaccc
atcactgccttggccttctccgagaacggctactacctggcgactgccgccgacgatgcc
gtggtcaagctgtgggatttacgcaaactgaaaaatttcaagaatattaccctagatgat
agatacgaggtgaagtcactgtgctttgaccaaagtggaacctacttggctgtagctggc
actgatctgagagtttacctctgcaaacagtggcaggaactcaaggttttctcagatcac
acagacatgacaactggtgttcgatttggccagcacacaacctttgtatcttccgtcagc
atggatcgcagcctcaagttctatgggctctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (54)   

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