KEGG   Alpha proteobacterium HIMB5: HIMB5_00000920
Entry
HIMB5_00000920    CDS       T02250                                 
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
apm  Alpha proteobacterium HIMB5
Pathway
apm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HIMB5_00000920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apm03019]
    HIMB5_00000920
   03110 Chaperones and folding catalysts [BR:apm03110]
    HIMB5_00000920
   03029 Mitochondrial biogenesis [BR:apm03029]
    HIMB5_00000920
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:apm04147]
    HIMB5_00000920
Enzymes [BR:apm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     HIMB5_00000920
Messenger RNA biogenesis [BR:apm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HIMB5_00000920
Chaperones and folding catalysts [BR:apm03110]
 Heat shock proteins
  HSP60 / Chaperonin
   HIMB5_00000920
Mitochondrial biogenesis [BR:apm03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    HIMB5_00000920
Exosome [BR:apm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HIMB5_00000920
  Exosomal proteins of other body fluids (saliva and urine)
   HIMB5_00000920
  Exosomal proteins of breast cancer cells
   HIMB5_00000920
  Exosomal proteins of colorectal cancer cells
   HIMB5_00000920
  Exosomal proteins of bladder cancer cells
   HIMB5_00000920
SSDB
Motif
Pfam: Cpn60_TCP1 EAD9
Other DBs
NCBI-ProteinID: AFS46865
UniProt: J9YUY2
Position
complement(91900..93564)
AA seq 554 aa
MAKVVKFDAEARAAMIRGVNILADTVKVTLGPKGRNVVMDKSYGAPRITKDGVSVAKEID
LEDKFENMGAQMVKEVASKTNDEAGDGTTTATILAQAIVKEGVKYVTAGMNPMDVKRGID
AAVETVKENLVASAKKVKDSDEIAQVGTISANGDKEIGTMIAKAMQKVGNEGVITVEENK
GIETELDVVEGMQFDRGYLSPYFITNSDKMTTELDNPFILLHEKKLTNLQPMVPLLEAVV
QAGRPLMIISEDVEGEALATLVVNKLRGGLKVVAVKAPGFGDRRKAMLEDIAILTGGSVI
SEDLGIKLENVKLDDLGSCKKVKVDKDNSTIVNGAGKKSDIEARCGSIKQQIDETTSDYD
KEKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVEDALNATRAAVEEGIVTGGGCALLY
ASRDLSKVKVKGDDQKAGVDLVKKALEAPIRQITKNAGVDGSVVVGKLLEQNKKTHGYDA
QSEEYCDMFAKGIIDPVKVVRTALQDAASISGLLVTTEAMIADKPEEKDAGAAGGMPGGM
GGMGGMGGMGGMGM
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggcaaaagttgttaaatttgatgctgaagcaagagcagcaatgataagaggtgtaaat
atcttggccgacactgttaaagtaactttaggaccaaaaggaagaaatgttgttatggat
aaatcttatggtgctccaagaattactaaagatggtgtttcagttgctaaagaaattgac
ctagaagataaatttgaaaacatgggtgcacagatggtaaaggaagttgctagcaaaaca
aatgatgaagctggtgatggtacaactactgcaactattcttgcacaagcaattgttaaa
gaaggtgtaaaatatgttacagcaggaatgaaccctatggatgtaaaaagaggtatagat
gctgctgttgaaacagttaaagaaaacttagttgcttctgcaaaaaaagttaaagatagt
gatgagatagctcaagttggaacaatttcagcaaacggcgataaagaaattggaacaatg
attgcaaaagcaatgcaaaaagttggtaatgagggtgttatcactgttgaagaaaacaaa
ggtatagagacagagcttgatgtagttgaaggtatgcaatttgatagaggttatctatct
ccatactttattacaaacagtgataaaatgactacagagctagataatccatttattctt
ttacatgagaagaaattaacaaatctacaaccaatggttccacttttagaagctgttgtg
caagctgggagaccattaatgattatttctgaagatgttgaaggtgaagctttggcaact
ttagttgttaacaaattaagaggtggtttaaaagttgtagcagttaaagctccaggattt
ggtgatagaagaaaagcaatgttagaagatattgctatcctaactggtggatctgttatt
tctgaagatttagggattaaacttgaaaatgttaagttagatgatcttggttcatgtaaa
aaagttaaagttgataaagacaacagtacaattgtaaatggtgctggtaaaaaatctgac
attgaagcaaggtgtggttcgatcaaacaacaaattgatgaaacaacatctgattatgat
aaagaaaaacttcaagagagacttgctaaattagctggtggtgttgcagttatcaaagtt
ggtggtgcaacagaagttgaagttaaagagagaaaagacagagttgaagatgcattaaat
gcaactagagctgctgttgaagaaggtatcgtgactggtggtggatgtgctttgttatat
gcatcaagagatcttagcaaagttaaggttaaaggtgatgaccaaaaagctggtgtagat
cttgttaaaaaagcacttgaagcacctattagacaaattactaaaaatgctggagtagat
ggttcagttgtagttggtaaattgttagagcaaaataaaaaaactcatggttatgatgct
caaagtgaagagtattgtgatatgtttgcaaaaggtatcattgatcctgtgaaagttgtt
agaactgctttacaagatgcagcttctatttcaggattattagtaactactgaagcaatg
attgcagacaaacctgaagaaaaagatgctggtgcagctggtggaatgcctggaggaatg
ggcggcatgggtggaatgggtggaatgggtggaatgggaatgtaa

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