KEGG   Alpha proteobacterium HIMB5: HIMB5_00012480
Entry
HIMB5_00012480    CDS       T02250                                 
Name
(GenBank) pseudouridylate synthase I
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
apm  Alpha proteobacterium HIMB5
Brite
KEGG Orthology (KO) [BR:apm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:apm03016]
    HIMB5_00012480
Enzymes [BR:apm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     HIMB5_00012480
Transfer RNA biogenesis [BR:apm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HIMB5_00012480
 Prokaryotic type
    HIMB5_00012480
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AFS47989
UniProt: J9YW67
Position
complement(1139773..1140513)
AA seq 246 aa
MIRYQILIEYVGTNFKGWQVQKKGITVQGLLQQEISKILKEKIKVYGSGRTDAGVHAIQQ
SAHFDTSNEIKDIKKFFNSLNFFINPYQVSLLKLIKKNSNFHARFSAKKRLYKYVIINRT
SMPVIEKRRSWHVRKDLDIQLMKKGAQKLLGKKDFSTFRASSCNAKSPIRTMEKATVSSK
NNKIIIKFQSQSFLQQQVRSMVGCLKYLGEKKWTVSQFTKVIKSKNRKLCAPPAPAEGLF
LERVFY
NT seq 741 nt   +upstreamnt  +downstreamnt
atgattagatatcaaattctaattgaatatgttggtaccaattttaaaggatggcaagtt
caaaaaaaaggaattactgttcaaggattactgcagcaagaaatatcaaaaattcttaaa
gaaaaaataaaagtttacggttcaggacgtacagatgctggagtgcacgcaattcaacaa
tcagcccattttgatacttcaaatgaaatcaaggatataaagaaatttttcaattcatta
aatttttttattaatccttatcaggtctctttattaaaattgattaaaaaaaattcaaat
tttcatgcaagattttcagcaaaaaaaagactttataaatatgtaataataaatcgaacc
agtatgccagttattgaaaagagaagatcgtggcatgtgagaaaagacttagatattcaa
ttaatgaaaaagggcgcacaaaaacttttagggaaaaaagatttttcaacttttagagcc
tcaagttgtaatgccaaaagcccaattagaacaatggagaaagcaacagtttcaagtaag
aacaacaaaattatcataaaatttcaatctcaatcatttttacaacaacaagtcagatca
atggttggttgcttgaaatacttaggtgaaaaaaaatggacagtcagccaatttacaaaa
gttataaagtcaaaaaataggaagctttgtgcaccaccagcacctgctgaaggattattt
ttggagagagttttttattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (1500)   
   KEGG ORTHOLOGY (1)   
   RefGene (1497)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (1507)   

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